Table 2. Fish rh1 with variation at site 122 do not necessarily have variation at coevolving sites 119, 123, and 124.
Sites with variation relative to the Vertebrate consensus (LEIA) are in bold and highlighted grey.
| Order | Species | Accession | Common name | 119 | 122 | 123 | 124 | Ecology notes from FishBase |
|---|---|---|---|---|---|---|---|---|
| Lepisosteiformes | Lepisosteus oculatus | JN230969.1 | spotted gar | L | M | I | S | Freshwater; brackish; demersal. (Ref. 2060) |
| Atractosteus tropicus | JN230970.1 | Tropical Gar | L | M | L | S | Freshwater; demersal | |
| Osteoglossiformes | Mormyrops anguilloides | JN230973.1 | Cornish Jack | T | I | I | A | Freshwater; demersal; potamodromous (Ref. 51243) |
| Osteoglossum bicirrhosum | KY026030.1 | Silver arowana | T | I | I | A | Freshwater; benthopelagic | |
| Alepocephalifromes | Alepocephalus bicolor | JN230974.1 | Bicolor slickhead | L | Q | I | A | Marine; bathydemersal; depth range 439–1080 m (Ref. 44023). |
| Bathytroctes microlepis | JN544540.1 | Smallscale smooth-head | L | D | I | A | Marine; bathypelagic; depth range 0–4900 m (Ref. 58018) | |
| Conocara salmoneum | JN412577.1 | Salmon smooth-head | L | Q | I | A | Marine; bathypelagic; depth range 2400–4500 m (Ref. 40643) | |
| Galaxiiformes | Galaxias maculatus | JN231000.1 | Inanga | L | M | I | G | Marine; freshwater; brackish; benthopelagic; catadromous (Ref. 51243). |
| Stomiatiformes | Argyropelecus aculeatus | JN412571.1 | Lovely Hatchetfish | H | Q | I | A | Marine; bathypelagic; depth range 100–2056 m (Ref. 27311) |
| Vinciguerria nimbaria | JN412570.1 | Oceanic lightfish | H | Q | V | A | Marine; bathypelagic; depth range 20–5000 m (Ref. 4470) | |
| Ateleopodiformes | Ateleopus japonicus | KC442218.1 | Pacific Jellynose Fish | L | M | I | S | Marine; bathydemersal; depth range 140–600 m (Ref. 44036). |
| Myctophiformes | Benthosema suborbitale | JN412576.1 | Smallfin lanternfish | H | Q | V | G | Marine; bathypelagic; oceanodromous; depth range 50–2500 m (Ref. 26165) |
| Lampanyctus alatus | JN412575.1 | Winged lanternfish | H | Q | V | A | Marine; bathypelagic; oceanodromous; depth range 40–1500 m (Ref. 26165) | |
| Neoscopelus microchir | KC442224.1 | Shortfin neoscopelid | L | Q | I | A | Marine; bathypelagic; depth range 250–700 m (Ref. 4481) | |
| Gadiiformes | Coryphaenoides guentheri | JN412578.1 | Gunther’s grenadier | L | V | I | A | Marine; bathydemersal; depth range 831–2830 (Ref. 1371) |
| Beryciformes | Melamphaes suborbitalis | JN231006.1 | Shoulderspine bigscale | L | Q | I | A | Marine; brackish; bathypelagic; depth range 500–1000 m (Ref. 31511). |
| Holocentriformes | Holocentrus rufus | KC442230.1 | Longspine squirrelfish | L | M | I | S | Marine; reef-associated; depth range 0–32 m (Ref. 3724). |
| Myripristis murdjan | KC442231.1 | Pinecone soldierfish | L | M | I | G | Marine; reef-associated; depth range 1–50 m (Ref. 9710) | |
| Scombriformes | Aphanopus carbo | EU637938.1 | Black scabbardfish | H | Q | I | G | Marine; bathypelagic; oceanodromous (Ref 108735); 200–2300 m (Ref. 108733) |
| Cubiceps gracilis | EU637952.1 | Driftfish | - | Q | I | A | Marine; pelagic-oceanic; oceanodromous (Ref. 51243); |