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. 2018 Oct 26;8:15895. doi: 10.1038/s41598-018-34256-3

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Functional enrichment analysis of up-regulated DE genes in dag1 vs wild type hypocotyls. (a,b) Scatterplot view of enriched GO terms for Biological Process (a) and Molecular Function categories (b) according to REVIGO. Each bubble represents a representative GO term based on semantic similarity clustering. Bubbles are coloured according to p-values and their size indicates the absolute log10 (p-value). Bubbles x and y coordinates are derived by multidimensional scaling of GO term semantic similarity matrices so that more semantically similar GO terms are also closer in the two-dimensional plot.