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. Author manuscript; available in PMC: 2018 Oct 27.
Published in final edited form as: J Phys Chem B. 2017 Mar 31;121(15):3882–3894. doi: 10.1021/acs.jpcb.7b00998

Figure 5:

Figure 5:

Matrix of structures (lower triangle) and contact maps (upper triangle) for various combinations of NRLs alternating in sequence along the 100 core fiber. While general characteristics are shared with randomly distributed NRL sequences, subtle differences in contact types are observed, such as in the 27/45 bp systems, where long-range contacts are significantly higher than in the randomly distributed case. Additionally, hairpins form spontaneously in the 36/45 bp and 45/54 bp case which are not seen in the randomly distributed case.