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. 2018 Oct 25;56(11):e00843-18. doi: 10.1128/JCM.00843-18

TABLE 1.

Amino acid sequences of ribosomal and stress response proteins tentatively underlying the species-specific MALDI-TOF spectrum peaks in K. pneumoniae and K. variicolaa

Protein Species Amino acid sequenceb Modification m/z m/(2z)
L31p K. pneumoniae MKKGIHPNYDEITATCSCGNVMKIRSTVGHDLNLDV[. . .]* 7,742 3,871
K. variicola MKKGIHPKYEEITATCSCGNVMKIRSTVGHDLNLDV[. . .]* 7,770 3,885
L28p K. pneumoniae (M)SRVCQ[. . .]VSAKGMRVIDKKGIDTVLAELRARGEKY* dMet 8,875 4,437
K. variicola (M)SRVCQ[. . .]VSAKGMRVIDKKGIDTVLSELRARGEKY* dMet 8,891 4,446
S15p K. pneumoniae (M)SLSVE[. . .]QRRKLLDYLKRKDVARYAALIERLGLRR* dMet 10,077 5,038
K. variicola (M)SLSVE[. . .]QRRKLLDYLKRKDVARYSALIERLGLRR* dMet 10,062 5,031
YjbJ K. pneumoniae MNKDEIGGNWKQFKG[. . .]YEKDQAEKEVSDWEHKNDYRW* 8,309 4,155
K. variicola MNKDEIGGNWKQLKG[. . .]YAKDQAEKEVSDWEHKNDYRW* 8,217 4,108
a

The calculated molecular mass was used to determine the theoretical peak position of the single (m/z) or double [m/(2z)] charged ion of the unmodified or demethionated (dMet) form of the protein.

b

Amino acid substitutions that lead to a mass change are underlined. Ellipses within brackets indicate parts of the sequence without differences; asterisks indicate stop codons.