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. 2018 Oct 5;9(78):34794–34809. doi: 10.18632/oncotarget.26198

Table 2. Overview of identified alterations of proteins and genes and applied agents for 28 evaluated patients.

Patient number Identified potential drug targets/drug exclusion targets Initially applied agents
1 Strong HER-2 overexpression, Ki-67 high, strong Topoisomerase-II-α overexpression Pertuzumab, Trastuzumab and chemotherapy
2 Strong EGFR overexpression, RAS wild-type, increased phosphorylation of Akt, activating PIK3CA mutation, activating KIT mutation Gemcitabine and Cisplatin plus Cetuximab
3 Strong EGFR overexpression, KRAS mutation, increased phosphorylation of ERK1/2, MEK1/2 and Akt, moderately strong HER-2 overexpression (2+), no HER-2 amplification Everolimus
4 Increased phosphorylation of ERK1/2, MEK1/2 and Akt, Ki-67 high, strong Topoisomerase-II-α overexpression Topotecan
5 Strong EGFR overexpression, RAS wild-type, increased phosphorylation of MEK1/2 and Akt, Ki-67 high, moderately strong Topoisomerase-II-α overexpression Panitumumab
6 Moderately strong c-MET overexpression, weak expression of EGFR, increased phosphorylation of MEK1/2, Ki-67 high, low Topoisomerase-II-α expression Folinic acid, Fluorouracil and Irinotecan (FOLFIRI)
7 Moderately strong EGFR overexpression, RAS wild-type, increased phosphorylation of ERK1/2, MEK1/2 and Akt, Ki-67 high, moderately strong Topoisomerase-II-α overexpression Everolimus
8 Strong EGFR overexpression, KRAS mutation, Ki-67 high, strong Topoisomerase-II-α overexpression Regorafenib
9 Strong EGFR overexpression, RAS wild-type, strong HER-2 overexpression, activating PIK3CA mutation, Ki-67 high, moderately strong Topoisomerase-II-α overexpression Trastuzumab and Lapatinib
10 Moderately strong EGFR overexpression, KRAS mutation, Ki-67 high, moderately strong Topoisomerase-II-α overexpression Folinic acid, Fluorouracil and Oxaliplatin (FOLFOX) and Bevacizumab, Regorafenib
11 Weak EGFR overexpression, RAS wild-type, Ki-67 high, moderately strong Topoisomerase-II-α overexpression Irinotecan and Panitumumab
12 Moderately strong EGFR overexpression, KRAS mutation, weak VEGFR-2 expression, increased phosphorylation of ERK1/2 and MEK1/2, strong c-MET overexpression, no MET amplification, Ki-67 high, moderately strong Topoisomerase-II-α overexpression Fluorouracil and Irinotecan and Bevacizumab
13 FLT3 mutation, Ki-67 high, low Topoisomerase-II-α expression Sunitinib
14 Moderately strong EGFR overexpression, RAS wild-type Folinic acid, Fluorouracil and Irinotecan (FOLFIRI) and Cetuximab
15 Strong EGFR overexpression, RAS wild-type Cisplatin and Gemcitabine
16 Strong EGFR overexpression, RAS wild-type, increased phosphorylation of ERK1/2 and Akt, moderately strong HER-2 overexpression (2+), no amplification, Ki-67 high PIPAC (Pressurized Intra Peritoneal Aerosol Chemotherapy)
17 Strong EGFR overexpression, RAS wild-type, increased phosphorylation of ERK1/2, Ki-67 high, strong Topoisomerase-II-α overexpression Vinorelbine and Cisplatin/Gemcitabine
18 Moderately strong EGFR overexpression, RAS wild-type, Increased phosphorylation of ERK1/2, MEK1/2 and Akt, moderately strong c-MET overexpression, Ki-67 high, low Topoisomerase-II-α expression Fluorouracil, Leucovorin, Oxaliplatin and Docetaxel (FLOT)
19 Moderately strong EGFR overexpression, RAS wild-type, Ki-67 high, strong Topoisomerase-II-α overexpression Regorafenib
20 Strong EGFR overexpression, RAS mutation status unknown, strong c-MET overexpression, no MET amplification, Ki-67 high, strong Topoisomerase-II-α overexpression Folinic acid, Fluorouracil and Irinotecan (FOLFIRI)
21 Strong EGFR overexpression, KRAS mutation, moderately strong c-MET overexpression, no MET amplification, Ki-67 high, strong Topoisomerase-II-α overexpression Folinic acid, Fluorouracil and Oxaliplatin (FOLFOX) and Bevacizumab
22 Strong EGFR overexpression, RAS wild-type, Ki-67 moderately high, low Topoisomerase-II-α expression Palliative radiation
23 Strong EGFR overexpression, RAS wild-type, strong c-MET overexpression, no MET amplification Nivolumab
24 Strong EGFR overexpression, RAS wild-type, activating EGFR mutation, Ki-67 high, strong Topoisomerase-II-α overexpression Radiotherapy, six months later Erlotinib
25 Weak EGFR overexpression, RAS wild-type, moderately increased phosphorylation of MEK1/2 Adriamycin
26 Moderately strong EGFR overexpression, RAS wild-type, moderately strong c-MET overexpression, no MET amplification, increased phosphorylation of ERK1/2 and MEK1/2 Fluorouracil, Leucovorin, Oxaliplatin and Docetaxel (FLOT)
27 Moderately strong EGFR overexpression, KRAS mutation, strong c-MET overexpression, no MET amplification, moderately strong EML4-ALK overexpression, ALK FISH negative, increased phosphorylation of MEK1/2, Ki-67 moderately high, low Topoisomerase-II-α expression Gemcitabine and nab-Paclitaxel
28 Moderately strong EGFR overexpression, RAS mutation status unknown, moderately strong c-MET overexpression, no MET amplification, moderately strong EML4-ALK overexpression, ALK FISH negative, Ki-67 high, strong Topoisomerase-II-α overexpression Folinic acid, Fluorouracil and Irinotecan (FOLFIRI) and Bevacizumab