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. 2018 Oct 23;9:2515. doi: 10.3389/fmicb.2018.02515

Table 1.

Primers used in this work.

Name Sequence (5′-3′) T1 Bp2 Reference
RPSLF CCAGCGCTTAAAAAT TGTCC 55 247 Olkkola et al., 2010
RPSLR TATCAAGAGCACCA CGAACG
INT1F GGCTCTCGGGTAAC ATCAAGG 54 242 Leverstein-van Hall et al., 2002
INT1R TCAGGAGATCGGAA GACCTC
CSF GGCATCCAAGCAGCAAG 56 VAR3 Lévesque et al., 1995
CSR AAAAGCAGACTTGA CCTGA
SAF TGCAAAA(G/A)CC(G/C) GA(A/G)GATATGG 56 305 This work
SAR TTCCTT(G/T)CG(G/A) CATA(G/T)CC(C/T)TT
SBF GATTGT(T/C)CG(T/C)CAT GAGCTGCT 57 327 This work
SBR GTGCTATCCAGGCAGC CGGTT
SCF TGCCT(A/C)AAATTGG(G/A) T(G/A)AGTT 52 368 This work
SCR ACCTAGCCA(A/G)ATTTCA AA(A/G)CCAAA
STREJF TGCAAAGCGAAAA AAGAAT 49 878 This work
STREJR TTATAATTTTCTTAAAAT TTTGCAAT
STRECF TGCAAAATCAAGATAAAT TTTTAAAAC 51 899 This work
STRECR TTACAATTTTCCTAAAAT TTTACAAT
STREFF GTATGCGCAAAAATGAT TAAAG 50 1110 This work
STREFR AAGGAAAAATTTAAATAT TGGTTTCA

1Annealing temperatures for PCR. 2PCR-Product size in bp. 3Variable size depending on gene-cassette structure (Lévesque et al., 1995).