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. 2018 Oct 29;59:25. doi: 10.1186/s40529-018-0241-y

Table 1.

Details of the whitish Tuber ITS sequences used in phylogenetic study

Taxa Voucher no. Origin GenBank Accession no. References
ITS LSU
Choiromyces alveolatus MES97 USA HM485332 Bonito et al. (2010a)
Choiromyces alveolatus HS2886 USA HM485333 Bonito et al. (2010a)
Choiromyces alveolatus p688L USA EU669426 Unpublished
Choiromyces alveolatus MES97 USA JQ925660 Bonito et al. (2013)
T. alboumbilicum YAAS L2324a China KJ742702 Li et al. (2014)
T. bellisporum JT7270 USA FJ809856 FJ809827 Bonito et al. (2010b)
T. bellisporum JT6060 USA FJ809857 FJ809828 Bonito et al. (2010b)
T. borchii GB45 Italy HM485344 Bonito et al. (2010a)
T. borchii CMI-UNIBO 3405 Italy FJ554521 Bonuso et al. (2010)
T. borchii Tar042 Italy KT165326 Belfiori et al. (2016)
T. borchii AH39139 Spain JN392291 Alvarado et al. (2012)
T. borchii GB32 Italy FJ809852 Bonito et al. (2010b)
T. californicum JT22590 USA HM485351 Bonito et al. (2010a)
T. californicum src880 USA HM485350 Bonito et al. (2010a)
T. californicum RPC-9 USA AF156927 Taylor and Bruns (1999)
T. castellanoi JT19924 USA FJ809859 FJ809830 Bonito et al. (2010b)
T. castellanoi JT28069 USA FJ809860 FJ809831 Bonito et al. (2010b)
T. dryophilum Italy AF003917 Unpublished
T. dryophilum GB37 Italy HM485354 JQ925688 Bonito et al. (2013)
T. dryophilum GB35 Italy JQ925687 Bonito et al. (2013)
T. elevatireticulatumb XTAM1 Taiwan MF540616 LC425119 This study
T. elevatireticulatum XTAM2 Taiwan MF540617 LC425120 This study
T. elevatireticulatum XTAM3a Taiwan MF540618 LC425121 This study
T. elevatireticulatum XTAM4 Taiwan MF540619 LC425122 This study
T. elevatireticulatum XTAM5 Taiwan MF540620 This study
T. elevatireticulatum XTAM7 Taiwan MF540621 LC425123 This study
T. elevatireticulatum XTBX1 Taiwan LC425124 This study
T. elevatireticulatum XTBX4 Taiwan LC425125 This study
T. elevatireticulatum XTBX5 Taiwan LC425126 This study
T. flavidosporum K213a Japan AB553446 AB553520 Kinoshita et al. (2016)
T. gibbosum SPCP_B2a Canada KP972062 Berch and Bonito (2016)
T. gibbosum JT6555 USA FJ809833 Bonito et al. (2010a)
T. gibbosum JT19424 USA HM485362 FJ809834 Bonito et al. (2010a)
T. huizeanum BJTC FAN186a China JQ910651 NG_059991 Fan et al. (2013a)
T. japonicum N88a Japan AB553444 Kinoshita et al. (2016)
T. japonicum K228 Japan AB553519 Kinoshita et al. (2016)
T. latisporum HKAS 44315a China DQ898183 Chen and Liu (2007)
T. latisporum BJTC FAN126 China KP276204 Fan et al. (2016a)
T. lijiangense BJTC FAN307 China KP276188 KP276203 Fan et al. (2016a)
T. liui HKAS 48269 China DQ898182 Chen and Liu (2007)
T. liyuanum BJTC FAN162a China JQ771191 Fan and Cao (2013)
T. liyuanum BJTC FAN162a China KT067698 Fan et al. (2016b)
T. maculatum M4TM Poland KJ524530 Unpublished
T. maculatum Mac1 Italy AF106889 Unpublished
T. maculatum ZB2656 Hungary JF261366 Unpublished
T. microsphaerosporum BJTCFan152a China KF805726 Fan and Yue (2013)
T. microverrucosum BJTC FAN142a China JN870099 Fan et al. (2011)
T. microverrucosum BJTC FAN142a China KT067696 Fan et al. (2016b)
T. oligospermum AH39338 France JN392266 JN392319 Alvarado et al. (2012)
T. oligospermum AH37867 Italy JN392259 JN392322 Alvarado et al. (2012)
T. oregonense SPCP_B26 Canada KP972064 Berch and Bonito (2016)
T. oregonense DUKE GB284a USA FJ809874 Bonito et al. (2010b)
T. oregonense JT27945 USA FJ809836 Bonito et al. (2010b)
T. oregonense JT8767 USA FJ809837 Bonito et al. (2010b)
T. panzhihuanense DXJ267a China JQ978648 Deng et al. (2013)
T. panzhihuanense HKAS:95329 KY174963 Unpublished
T. panzhihuanense HKAS:95328 KY174962 Unpublished
T. pseudomagnatum BJTC FAN163a China JQ771192 Fan and Cao (2013)
T. pseudomagnatum BJTC FAN163a China KP276192 Fan et al. (2016b)
T. pseudosphaerosporum BJTCFan250a China KF744063 Fan and Yue (2013)
T. pseudosphaerosporum BJTCFan250a China KP276194 Fan et al. (2016a)
T. puberulum Serbia FM205642 Marjanovic et al. (2010)
T. puberulum ZB436 Hungary JF261369 Unpublished
T. shearii OSC51052 USA HM485389 Bonito et al. (2010a)
T. shearii OSC51052 USA JF419280 Guevara et al. (2013)
T. shearii JT12498 USA GQ221450 Unpublished
T. sinopuberulum BJTC FAN157a China JQ690073 JQ690070 Fan et al. (2013b)
T. sinosphaerosporum BJTC FAN135a China JX092086 Fan et al. (2013c)
T. sinosphaerosporum BJTC FAN135a China KP276195 Fan et al. (2016a)
T. sphaerospermum AH37798 Morocco JN392245 JN392304 Alvarado et al. (2012)
T. sphaerospermum AH39197 Spain JN392242 JN392307 Alvarado et al. (2012)
T. thailandicum CMU-MTUF1a Thailand KP196328 KP196333 Suwannarach et al. (2015)
T. thailandicum CMU-MTUF2 Thailand KP196329 KP196334 Suwannarach et al. (2015)
T. turmericum BJTC FAN473a China KT758837 Fan et al. (2015)
T. vesicoperidium BJTC FAN155a China JQ690071 JQ690068 Fan et al. (2013b)
T. xanthomonosporum YAAS L3185a China KJ162154 Qing et al. (2015)
T. zhongdianense wang0299a China DQ898187 Chen and Liu (2007)
T. zhongdianense BJTC FAN176 China KP276201 Fan et al. (2016a)

aHolotype

bNew species described in this study are bold as indication