Table 2.
The 1st percentile of human protein-coding genes which contain human-specific STRs (length-wise) in their TIS-flanking cDNA sequence
| Gene symbol | Gene Ensembl ID | Transcript ID | STR | GO term |
|---|---|---|---|---|
| KCTD19 | ENSG00000168676 | ENST00000566295 | (A)20 | Protein homooligomerization |
| ATP8B1 | ENSG00000081923 | ENST00000585322 | (A)17 | Magnesium ion binding |
| C1QTNF1 | ENSG00000173918 | ENST00000583904 | Collagen trimer | |
| SEC11A | ENSG00000140612 | ENST00000558196 | Peptidase activity | |
| SHQ1 | ENSG00000144736 | ENST00000463369 | – | |
| SPRY1 | ENSG00000164056 | ENST00000505319 | Multicellular organism development | |
| ENST00000610581 | ||||
| DDX20 | ENSG00000064703 | ENST00000475700 | (A)16 | ATP binding |
| NAB1 | ENSG00000138386 | ENST00000409641 | (T)16 | Negative regulation of transcription |
| SGIP1 | ENSG00000118473 | ENST00000435165 | (A)16 | – |
| SOX6 | ENSG00000110693 | ENST00000528252 | (A)14 | Multicellular organism development |
| DPP6 | ENSG00000130226 | ENST00000406326 | (T)13 | Proteolysis |
| ENST00000377770 | ||||
| MLF1 | ENSG00000178053 | ENST00000482628 | (G)13 | – |
| SHC4 | ENSG00000185634 | ENST00000558220 | (T)13 | Stem cell differentiation |
| ITGB1BP2 | ENSG00000147166 | ENST00000538820 | (T)12 | Calcium ion binding |
| NELL2 | ENSG00000184613 | ENST00000548531 | Calcium ion binding | |
| GIPC1 | ENSG00000123159 | ENST00000393028 | (GCG)11 | – |
| ENST00000345425 | ||||
| ENST00000587210 | ||||
| HBS1L | ENSG00000112339 | ENST00000527578 | (T)11 | GTPase activity |
| HOPX | ENSG00000171476 | ENST00000556376 | (A)11 | Cell differentiation |
| OR7D2 | ENSG00000188000 | ENST00000642043 | (T)11 | G protein-coupled receptor activity |
| RNF145 | ENSG00000145860 | ENST00000520638 | Integral component of membrane | |
| TXNL4A | ENSG00000141759 | ENST00000592837 | mRNA splicing, via spliceosome | |
| ABCF1 | ENSG00000204574 | ENST00000468958 | (A)10 | ATP binding |
| ARHGEF18 | ENSG00000104880 | ENST00000359920 | (T)10 | Rho guanyl-nucleotide exchange factor activity |
| ARL14 | ENSG00000179674 | ENST00000320767 | (A)10 | GTP binding |
| ASNS | ENSG00000070669 | ENST00000448127 | (T)10 | Asparagine biosynthetic process |
| EIF2S1 | ENSG00000134001 | ENST00000466499 | Translation initiation factor activity |