Table 1.

Distribution of sequenced reads from raw data to cleaned sequences

Type	Black skin		Red skin		White skin
	Total reads	%	Total reads	%	Total reads	%
Raw reads	20,502,959	100	16,916,198	100	19,839,224	100
tRNA	173,761	0.88	247,404	1.53	221,565	1.17
snoRNA	4455	0.023	4818	0.029	5169	0.027
snRNA	3143	0.016	4346	0.027	4199	0.022
rRNA	175,928	0.90	150,346	0.93	180,280	0.95
scRNA	6980	0.036	7887	0.048	7890	0.042
Intro_antisense	503,101	2.56	437,439	2.70	558,702	2.94
Exon_antisense	197,485	1.01	186,048	1.14	168,655	0.889
Other	18,584,128	94.58	15,155,625	93.59	17,835,047	93.96