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. 2018 Oct 30;8:16071. doi: 10.1038/s41598-018-34457-w

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Phylogenetic relationship among the Euglenophyta, with number of introns, presence of maturases and inverted repeat (IR) losses, indicated. The best-scoring maximum likelihood (ML) tree inferred from 57 cpDNA-encoded proteins and two rRNA genes is presented. The numbers on the nodes indicate the ML bootstrap support (bs). An asterisks (*) indicates that the corresponding branch received a BS value of >95%; values below <70% are not presented. The scale bar denotes the estimated number of amino acid substitutions per site. The plastid structure and number of introns are depicted next to the name of the taxa. Number and type (mat1, mat2, mat5) of maturases are denoted on the branches by dots. Species names in bold indicate that their plastid genome sequence is complete.