Table 1.
Fish # | IGFBP-2b1 | IGFBP-2b2 | Average Mutant % | Average Frame-shift % | IGFBP-2b Abundance (ADU) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Target Reads | Mutant Reads | Mutant % | Frameshift Mutant Reads | Frame-shift % | Target Reads | Mutant Reads | Mutant % | Frameshift Mutant Reads | Frame-shift % | ||||
C-75 | 102205 | 439 | 0.43 | 208 | 0.20 | 73599 | 315 | 0.43 | 315 | 0.43 | 0.43 | 0.32 | 4770.6 |
M-38 | 130384 | 12820 | 9.83 | 6658 | 5.11 | 75747 | 1630 | 2.15 | 1292 | 1.71 | 5.99 | 3.41 | 2040.0 |
M-39 | 106473 | 93191 | 87.53 | 67537 | 63.43 | 93341 | 54711 | 58.61 | 53338 | 57.14 | 73.07 | 60.29 | 606.9 |
M-42 | 117540 | 82728 | 70.38 | 54061 | 45.99 | 99031 | 79321 | 80.10 | 69191 | 69.87 | 75.24 | 57.93 | 2138.1 |
M-45 | 100114 | 86525 | 86.43 | 21788 | 21.76 | 112178 | 76858 | 68.51 | 68638 | 61.19 | 77.47 | 41.48 | 796.9 |
M-46 | 110024 | 57975 | 52.69 | 10726 | 9.75 | 94621 | 20416 | 21.58 | 19719 | 20.84 | 37.14 | 15.30 | 2543.8 |
M-47 | 105896 | 105599 | 99.72 | 16436 | 15.52 | 107615 | 57443 | 53.38 | 48417 | 44.99 | 76.55 | 30.26 | 132.1 |
M-48 | 116452 | 71837 | 61.69 | 31584 | 27.12 | 114099 | 36394 | 31.90 | 35148 | 30.80 | 46.80 | 28.96 | 2379.6 |
M-49 | 98969 | 98887 | 99.92 | 70078 | 70.81 | 81599 | 67339 | 82.52 | 47132 | 57.76 | 91.22 | 64.29 | NA |
M-56 | 94822 | 81564 | 86.02 | 9052 | 9.55 | 92340 | 60122 | 65.11 | 53173 | 57.58 | 75.57 | 33.57 | 720.2 |
M-59 | 119493 | 57773 | 48.35 | 42019 | 35.16 | 94932 | 32508 | 34.24 | 32508 | 34.24 | 41.30 | 34.70 | 3192.6 |
M-62 | 106914 | 93317 | 87.28 | 9637 | 9.01 | 118782 | 70794 | 59.60 | 61009 | 51.36 | 73.44 | 30.19 | 220.7 |
M-63 | 106686 | 81489 | 76.38 | 67488 | 63.26 | 93837 | 43035 | 45.86 | 42660 | 45.46 | 61.12 | 54.36 | 407.5 |
M-64 | 89830 | 43978 | 48.96 | 12900 | 14.36 | 108598 | 30162 | 27.77 | 29792 | 27.43 | 38.37 | 20.90 | 2163.1 |
M-73 | 71027 | 5598 | 7.88 | 1166 | 1.64 | 94429 | 2812 | 2.98 | 2708 | 2.87 | 5.43 | 2.26 | 3289.9 |
M-82 | 88604 | 56730 | 64.03 | 51520 | 58.15 | 103346 | 55836 | 54.03 | 53925 | 52.18 | 59.03 | 55.17 | 860.9 |
M-89 | 95525 | 26763 | 28.02 | 9263 | 9.70 | 122216 | 31536 | 25.80 | 30544 | 24.99 | 26.91 | 17.35 | 3057.2 |
M-90 | 109703 | 104315 | 95.09 | 29700 | 27.07 | 109751 | 89246 | 81.32 | 86991 | 79.26 | 88.21 | 53.17 | 516.4 |
M-93 | 86706 | 58523 | 67.50 | 26839 | 30.95 | 94676 | 52436 | 55.38 | 22596 | 23.87 | 61.44 | 27.41 | 1206.1 |
M-95 | 100239 | 27951 | 27.88 | 21601 | 21.55 | 90964 | 42868 | 47.13 | 11029 | 12.12 | 37.51 | 16.84 | 2062.3 |
M-96 | 111179 | 95667 | 86.05 | 59567 | 53.58 | 101967 | 68983 | 67.65 | 66613 | 65.33 | 76.85 | 59.46 | 644.5 |
M-97 | 80600 | 78020 | 96.80 | 57203 | 70.97 | 73712 | 54927 | 74.52 | 49361 | 66.96 | 85.66 | 68.97 | 545.5 |
M-106 | 71828 | 70874 | 98.67 | 20493 | 28.53 | 107918 | 72139 | 66.85 | 60598 | 56.15 | 82.76 | 42.34 | 243.9 |
M-107 | 87747 | 68541 | 78.11 | 45343 | 51.67 | 85947 | 37473 | 43.60 | 35938 | 41.81 | 60.86 | 46.74 | 916.1 |
M-108 | 96546 | 88737 | 91.91 | 25460 | 26.37 | 112393 | 56845 | 50.58 | 53891 | 47.95 | 71.25 | 37.16 | 772.1 |
The number and percent reads that result in frameshift mutations are also indicated. Averaged across all samples, 99.7% of the filtered reads from the IGFBP-2b1 PCR mapped to the IGFBP-2b1 reference sequence (range: 96.5%–99.9%). Similarly, 99.86% of the filtered reads from the IGFBP-2b2 PCR mapped to the IGFBP-2b2 target reference (range: 98.5%–99.9%). ADU: arbitrary density units.