Table 5.
Gene Description | Gene IDs | Time | LogFC | FDR |
---|---|---|---|---|
Recognition/cell adhesion/protein binding | ||||
Fibrinogen | TR120914_c5_g8 | 1 h | 11.2 | 8.3 e-5 |
Ig superfamily | TR137811_c2_g1 | 5 h | 10.0 | 0.001 |
Ank repeats and ion transport domain-containing gene | TR142305_c0_g2 | 1 h | 9.2 | 0.004 |
Gene containing Ig domains and a CARD domain | TR154561_c0_g1 | 1 h | 10.5 | 4.3 e-4 |
Signalling cascade | ||||
DEATH domain-containing gene (CRADD-like) | TR165768_c5_g2 | 1 h | 11.2 | 8.3 e-5 |
Serine/Threonine protein receptor-like kinase | TR23945_c0_g1 | 1 h | 10.2 | 4.5 e-4 |
TRAF2 | TR153933_c4_g2 | 1 h | 9.8 | 8.3 e-5 |
Kelch motif containing gene | TR146020_c0_g1 | 3 h; 5 h |
−12.6; − 13.5 |
4.6 e-5;
2.4 e-7 |
Lipid-mediated signalling | ||||
Phospholipase D | TR123257_c3_g1 | 1 h | 9.6 | 0.002 |
Extracellular matrix | ||||
Collagen | TR287787_c0_g1 | 1 h; 3 h; 5 h |
−11.0; −12.1; −11.6 |
0.003;
1.4 e-4; 1.1 e-4 |
Chaperone | ||||
Heat shock protein 70 | TR98706_c0_g1 | 3 h | 12.2 | 2.6 e-4 |
DNA regulation | ||||
Histone | TR1159_c0_g1 | 3 h | −7.1 | 0.004 |
Gene description is based on domain annotation and/or blast results. Supplementary Information provides full information on annotation (including e-values) (Supplementary Table S7) and full DGE results (here we provide rounded log2 fold change and FDR p-values, full values are reported in Supplementary Table S4). Log FC: log2 (fold change). Positive values of Log FC denote up-regulated genes and are coloured in orange; negative values of log FC denote down-regulated genes and are coloured in blue. FDR: false discovery rate-corrected p-value. Ig: immunoglobulin; Ank: Ankyrin; CARD: caspase recruitment domain.