Table 2.
Variant (rs ID if applicable) | Exon | Protein change | Conservation | Prevalence in control population [MAF]* | Grantham difference score | Human Splicing Finder 3.0 | PolyPhen2 SIFT, CADD Predictors |
---|---|---|---|---|---|---|---|
c.804delC | 8 | p.Leu269Trpfs*13 | Residue conserved, within conserved region | Not reported | n/a | Activation of an exonic cryptic donor site. Creation of an exonic ESS site | n/a |
c.1078C > T rs778856227 | 9 | p. Arg360Trp | Residue conserved, within conserved region | Singleton | 101 | Creation of an exonic ESS site | Deleterious (PolyPhen 1.0; SIFT 0.02, CADD 35) |
Reference seq. ENST00000334571; NM_182476.2; UniProt peptide Q9Y2Z9.
Estimation based on data of 60,706 multiethnic individual genomes catalogued by the Exome Aggregation Consortium (ExAC; accessed 28th May 2018)
MAF minor allele frequency, n/a not applicable, ESS exonic splicing silencer