Table 4.
Gene | CHR | BP Start | BP Stop | # SNPs | Test Statistic | P Value | |
---|---|---|---|---|---|---|---|
Health ABC DSST cognitive decline analysis | FOS | 14 | 74815283 | 74818665 | 41 | 98.1 | 7.88 × 10−3 |
CHRNA4 | 20 | 61445108 | 61463139 | 26 | 73.9 | 8.93 × 10−3 | |
PPP2R3A | 3 | 137167256 | 137349423 | 75 | 306.0 | .013 | |
GNB1 | 1 | 1706588 | 1812355 | 25 | 79.2 | .013 | |
KCNQ2 | 20 | 61507985 | 61574437 | 46 | 110.7 | .015 | |
CYP2D6 | 22 | 40852444 | 40856827 | 28 | 110.9 | .016 | |
CREB3L1 | 11 | 46255803 | 46299548 | 22 | 58.1 | .016 | |
GRIN1 | 9 | 139153429 | 139183029 | 14 | 43.1 | .017 | |
CALML6 | 1 | 1836125 | 1838593 | 10 | 35.0 | .019 | |
GABRR3 | 3 | 99188216 | 99236521 | 100 | 289.2 | .022 | |
AKT2 | 19 | 45428063 | 45483105 | 27 | 76.7 | .024 | |
ADRBK1 | 11 | 66790480 | 66810605 | 13 | 40.8 | .024 | |
GRM2 | 3 | 51716120 | 51727665 | 7 | 29.1 | .027 | |
PPP1CA | 11 | 66922227 | 66925952 | 21 | 67.9 | .029 | |
CHRNA3 | 15 | 76674705 | 76700377 | 58 | 157.0 | .031 | |
SLC12A5 | 20 | 44091244 | 44122196 | 59 | 128.5 | .032 | |
CHRNB4 | 15 | 76703690 | 76720642 | 59 | 150.5 | .033 | |
CACNA1A | 19 | 13178256 | 13478274 | 161 | 286.5 | .034 | |
Health ABC 3MS cognitive decline analysis | PLA2G3 | 22 | 29860792 | 29866469 | 43 | 261.7 | 1.72 × 10−4 |
TRAK2 | 2 | 201950174 | 202024564 | 54 | 444.6 | 7.58 × 10−4 | |
TRAK2 | 2 | 201950174 | 202024564 | 54 | 444.6 | 7.77 × 10−4 | |
PLD1 | 3 | 172801311 | 173010967 | 151 | 583.4 | 4.30 × 10−3 | |
GABRR3 | 3 | 99188216 | 99236521 | 99 | 388.5 | 4.48 × 10−3 | |
HTR5A | 7 | 154493478 | 154508392 | 58 | 257.9 | 6.09 × 10−3 | |
GNG3 | 11 | 62231708 | 62233246 | 15 | 72.2 | 8.78 × 10−3 | |
SLC6A4 | 17 | 25549031 | 25586841 | 39 | 120.8 | .013 | |
GRM3 | 7 | 86111165 | 86332128 | 128 | 347.1 | .019 | |
CYP2D6 | 22 | 40852444 | 40856827 | 29 | 110.7 | .019 | |
ADCY9 | 16 | 3952652 | 4106187 | 128 | 262.7 | .022 | |
CHRM2 | 7 | 136203938 | 136352311 | 150 | 374.5 | .022 | |
ITPR3 | 6 | 33697138 | 33772326 | 118 | 271.6 | .026 | |
GNG4 | 1 | 233777607 | 233880677 | 68 | 139.3 | .046 | |
GNAS | 20 | 56848189 | 56919645 | 72 | 143.2 | .046 |
Abbreviations: BP, base position; CHR, chromosome; DSST, Digit Symbol Substitution Test; Health ABC, Health, Aging, and Body Composition; 3MS, Modified Mini-Mental State Examination; SNP, single nucleotide polymorphism; VEGAS, Versatile Gene-Based Association Study.