Table 3.
Differential expression in bacteriocytes at Day 3 of selected genes likely involved in chromatin remodeling, histone modifications, and regulation of gene expression.
| Transcript name | Drosophila melanogaster gene name | D. melanogaster gene ID | Description | log2FC | adj. P-value |
|---|---|---|---|---|---|
| Chromatin remodeling | |||||
| ACYPI004047-RA | ISWI | FBgn0011604 | Chromatin-remodeling complex ATPase chain ISWI | 0.9220 | 0.0140 |
| ACYPI008655-RA | ISWI | FBgn0011604 | Chromatin-remodeling complex ATPase chain ISWI | 1.2261 | 0.0457 |
| ACYPI002202-RA | mle | FBgn0002774 | ATP-dependent RNA helicase A | 1.8789 | 0.0313 |
| ACYPI000966-RA | msl-3 | FBgn0002775 | Male-specific lethal | 0.6669 | 0.0254 |
| Histone modifications | |||||
| ACYPI003204-RA | HDAC1 | FBgn0015805 | Histone deacetylase | 0.7026 | 0.0460 |
| ACYPI006180-RA | HDAC1 | FBgn0015805 | Histone deacetylase | 0.9776 | 0.0105 |
| ACYPI007884-RA | HDAC1 | FBgn0015805 | Histone deacetylase | 0.9957 | 0.0075 |
| Transcription factors | |||||
| ACYPI20040-RA | CG4050 | FBgn0020312 | Smile protein | –1.0657 | 0.0300 |
| ACYPI006800-RA | CG4328 | FBgn0036274 | Homeobox domain; Zinc finger | –1.1680 | 0.0380 |
| ACYPI008133-RA | fd64A | FBgn0004895 | Forkhead domain 64A | –1.2241 | 0.0339 |
| ACYPI38042-RA | grau | FBgn0001133 | Grauzone | –0.6974 | 0.0488 |
| ACYPI25052-RA | ham | FBgn0045852 | Hamlet | –1.4526 | 0.0255 |
| ACYPI48767-RA | hng1 | FBgn0034599 | Hinge1 | –0.9515 | 0.0320 |
| ACYPI41460-RA | nab | FBgn0259986 | NAB domain | –1.7592 | 0.0138 |
| ACYPI005162-RA | pnr | FBgn0003117 | Pannier | –1.2368 | 0.0125 |
| ACYPI000963-RA | rx | FBgn0020617 | Retinal homeobox | –1.4330 | 0.0408 |
| ACYPI005588-RA | TH1 | FBgn0039298 | Negative elongation factor C/D | –0.7142 | 0.0295 |
| ACYPI003817-RA | aatf | FBgn0031851 | Apoptosis antagonizing TF | 0.9469 | 0.0125 |
| ACYPI008254-RA | alh | FBgn0261238 | Alhambra | 0.7815 | 0.0112 |
| ACYPI001952-RA | atf6 | FBgn0033010 | Basic-leucine zipper TF-like | 1.5478 | 0.0245 |
| ACYPI39596-RA | atf6 | FBgn0033010 | Basic-leucine zipper TF-like | 1.6757 | 0.0041 |
| ACYPI47906-RA | atf6 | FBgn0033010 | Basic-leucine zipper TF-like | 0.6290 | 0.0338 |
| ACYPI46438-RA | CG32813 | FBgn0052813 | Myb/SANT-like DNA-binding domain | 1.0965 | 0.0240 |
| ACYPI003796-RA | da | FBgn0267821 | Daughterless | 1.3464 | 0.0458 |
| ACYPI51211-RA | GATAd | FBgn0032223 | GATA transcription factor | 0.7572 | 0.0082 |
| ACYPI30875-RA | onecut | FBgn0028996 | Onecut | 0.8380 | 0.0245 |
| ACYPI008477-RA | pzg | FBgn0259785 | putzig-like | 1.2298 | 0.0116 |
| ACYPI009169-RA | pzg | FBgn0259785 | putzig-like | 1.4285 | 0.0055 |
| ACYPI39352-RA | pzg | FBgn0259785 | putzig-like | 1.3891 | 0.0272 |
| ACYPI008724-RA | rept | FBgn0040075 | Reptin | 0.8225 | 0.0281 |