Table I. List of HLA peptides derived from the TAA group, identified among the GBM sHLA and mHLA peptidomes.
| Gene name | Sequence | Count # |
||
|---|---|---|---|---|
| sHLA non-cancerous | sHLA GBM | mHLA GBM tissue | ||
| ETV5 | FPDNQRPFL | 0 | 0 | 1 |
| FSSSHEGFSY | 0 | 1 | 0 | |
| GPAPAPHSL | 0 | 1 | 1 | |
| KVAGERYVY | 0 | 3 | 3 | |
| LPYAEGFAY | 0 | 6 | 2 | |
| MPGPPAHGF | 0 | 0 | 2 | |
| RPAMNYDKL | 0 | 2 | 1 | |
| VPRPPHQPLQM | 0 | 0 | 0 | |
| SOX4 | KIMEQSPDM | 0 | 10 | 4 |
| SAASASAAL | 0 | 19 | 0 | |
| SISNLVFTY | 0 | 4 | 1 | |
| MDM2 | GEISEKAKL | 0 | 9 | 2 |
| YTMKEVLFY | 1 | 0 | 1 | |
| GEISEKAKL | 0 | 9 | 2 | |
| SEQETLVRP | 0 | 3 | 0 | |
| DDR1 | AVGDGPPRV | 0 | 8 | 6 |
| DSPQDLVSL | 1 | 0 | 0 | |
| FLAEDALNTV | 0 | 2 | 6 | |
| LPPPPQNSV | 0 | 0 | 0 | |
| YLQVDLQRL | 0 | 0 | 3 | |
| CSF1 | HSSGSVLPLGELE | 2 | 1 | 0 |
| HTVDPGSAKQR | 1 | 7 | 3 | |
| TMEM108 | TVFSTSSLK | 0 | 17 | 2 |
| UBE2A | REYEKRVSA | 2 | 2 | 0 |
| RLQEDPPAGV | 0 | 14 | 6 | |
| BST2 | DASAEVERL | 2 | 5 | 0 |
| AAAPQLLIV | 1 | 5 | 0 | |
| VPLIIFTI | 0 | 14 | 1 | |
| NPM1 | DENEHQLSL | 0 | 3 | 1 |
| EAIQDLWQW | 0 | 0 | 1 | |
| EGSPIKVTL | 3 | 3 | 0 | |
| EITPPVVLR | 0 | 4 | 0 | |
| FEITPPVVL | 0 | 0 | 2 | |
| HQLSLRTV | 1 | 0 | 0 | |
| MSPLRPQNYLFG | 1 | 0 | 0 | |
| NYEGSPIKVTL | 0 | 0 | 0 | |
| QLSLRTVSL | 0 | 3 | 1 | |
| SPIKVTLATL | 1 | 13 | 1 | |
| VEAEAMNY | 0 | 6 | 1 | |
| VEAKFINY | 1 | 8 | 1 | |
| YEGSPIKVTL | 0 | 2 | 2 | |
| BCAP31 | AESASEAAKKY | 1 | 2 | 1 |
| KLDVGNAEV | 0 | 7 | 3 | |
| KYMEENDQL | 1 | 3 | 0 | |
| LEKAENQVL | 0 | 1 | 2 | |
| THVLEGAGNKL | 0 | 5 | 1 | |
| TLISQQATL | 0 | 0 | 0 | |
| CDKN2A | AAPGAPAAV | 0 | 0 | 2 |
| LPVDLAEEL | 1 | 7 | 2 | |
| SART3 | AAFTRALEY | 0 | 9 | 1 |
| AEAPRLAEY | 2 | 2 | 1 | |
| ARLEKVHSL | 0 | 1 | 4 | |
| AYIDFEMKI | 2 | 3 | 0 | |
| DHQVISVTF | 0 | 5 | 1 | |
| TVFVSNLPYSM | 1 | 0 | 0 | |
| PA2G4 | AEDLVVTKY | 0 | 1 | 0 |
| DVAQGTQVTGR | 1 | 1 | 0 | |
| IAFPTSISV | 2 | 21 | 5 | |
| KEGEFVAQF | 1 | 4 | 1 | |
| TPIEGMLSH | 1 | 9 | 1 | |
| COTL1 | FVISDRKEL | 1 | 8 | 3 |
| VYVLESWHL | 0 | 0 | 0 | |
| ATIC | KTLTPISAAY | 1 | 2 | 0 |
| NLYPFVKTV | 0 | 8 | 6 | |
| GPNMB | AARLPLDAA | 0 | 3 | 0 |
| ALTSTLISV | 0 | 7 | 3 | |
| GPNMB | AYMREHNQL | 2 | 0 | 1 |
| IENSPGNVV | 0 | 3 | 0 | |
| IPTEVCTII | 0 | 0 | 1 | |
| KGLSVFLNR | 3 | 6 | 1 | |
| VFLNRAKAVFF | 1 | 1 | 0 | |
| VLTSDSPAL | 0 | 1 | 1 | |
| CDK4 | ALTPVVVTL | 0 | 6 | 5 |
| FGLARIYSY | 1 | 4 | 1 | |
| ISTVREVAL | 2 | 3 | 1 | |
| SOX11 | AHSASEQQL | 1 | 0 | 1 |
| NFSDLVFTY | 0 | 1 | 1 | |