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Summary of significant CpG markers among the comparisons
| Comparison | # all markers | # hyper markers | # hypo markers |
|---|---|---|---|
| KD1 vs. HC | 12,209 | 1484 | 10,725 |
| KD3 vs. HC | 13,936 | 505 | 13,431 |
| KD3 vs. KD1 | 14,643 | 4669 | 9974 |
Based on the criteria of an FDR < 0.05 and variation ratio > 1.1, we identified significant CpG markers among the three comparisons. Hyper marker and hypo marker denoted the significant hyper-methylated and hypo-methylated markers, respectively
