Table 5.
Polymorphisms in mitochondrial isocitrate dehydrogenase (icd)
| Zymodeme | Strain/isolate | GenBank ID | 150 | 204 | 369 | 1038 |
|---|---|---|---|---|---|---|
| MON-1 | MHOM/FR/78/LEM75 | DQ449672.1 | G | T | T | C |
| MON-1 | MHOM/ES/1986/BCN16 | DQ449676.1 | . | . | . | . |
| MON-1 | MHOM/FR/1997/LSL29 | DQ449675.1 | . | . | . | . |
| MON-1 | MHOM/ES/1993/PM1 | DQ449674.1 | . | . | . | . |
| MON-1 | MHOM/FR/1995/LPN114 | DQ449673.1| | . | . | . | . |
| MON-1 | MHOM/PT/2000/IMT260 | DQ449677.1 | . | . | . | . |
| MON-1 | MHOM/TN/1980/IPT1 | MF347625 | . | . | . | – |
| MON-1 | MHOM/FR/78/LEM75 | MF347626 | . | . | . | – |
| MON-1 | Isolate 31u | MF347627 | . | . | . | – |
| MON-1 | Isolate 49u | MF347628 | . | . | . | – |
| MON-1 | Isolate 791 | MF347629 | . | . | . | – |
| MON-1 | Isolate 10816 | MF347630 | . | . | . | – |
| MON-1 | Isolate V2921 | MF347631 | . | . | . | – |
| MON-11 | MHOM/FR/1980/LEM189 | DQ449685.1 | . | . | C | . |
| MON-24 | MHOM/DZ/82/LIPA59 | MF347632 | . | C | C | – |
| MON-29 | MHOM/ES/82/BCN1 | MF347633 | . | . | . | – |
| MON-29 | MHOM/FR/1996/LEM3249 | DQ449678.1 | . | . | C | . |
| MON-72 | MHOM/IT/86/ISS218 | MF347634 | . | . | . | – |
| MON-78 | MHOM/MT/1985/BUCK | DQ449686.1 | . | . | C | . |
| MON-81 | MHOM/SD/1962/3Sa | DQ449689.1 | A | . | C | . |
| MON-183 | MHOM/ES/1991/LEM2298 | DQ449679.1 | . | . | . | . |
| MON-188 | MHOM/IT/1993/ISS800 | DQ449693.1 | . | . | C | . |
| MON-198 | MHOM/ES/1988/LLM175 | DQ449690.1 | . | . | . | . |
| MON-199 | MHOM/ES/1992/LLM373 | DQ449691.1 | . | . | . | . |
| MON-201 | MHOM/IT/93/ISS822 | MF347635 | . | . | . | – |
| MON-228 | MHOM/IT/1994/ISS1036 | DQ449692.1 | . | . | C | . |
| MON-267 | MHOM/SD/1997/LEM3472a | DQ449694.1 | A | . | C | A |
| MON-309 | ITOB/TR/2005/CUK2 | EU545241.1 | . | . | C | . |
| MON-309 | MHOM/TR/2005/CUK1 | EU545240.1 | . | . | C | . |
| ni | ITOB/TR/2007/CUK10 | EU545242.1 | . | . | C | . |
| non-MON-1 | MHOM/TR/2000/OG-VL | EU545243.1 | . | . | . | . |
| ni | ni | DQ449698.1 | . | . | . | . |
Zymodeme sequences obtained in this study are in bold
Abbreviation: ni not indicated
Key: . consensus sequence, – sequence not available
aInitially assigned to L. infantum and successively designated L. donovani [18]