Table 7.
Polymorphisms in glucose-6-phosphate dehydrogenase (g6pdh)
| Zymodeme | Strain/isolate | GenBank ID | 45 | 315 | 348 | 359 | 403 | 468 | 690 | 1191 |
|---|---|---|---|---|---|---|---|---|---|---|
| MON-1 | MHOM/FR/78/LEM75 | DQ449770.1 | T | C | T | A | G | T | C | C |
| MON-1 | MHOM/PT/2000/IMT260 | DQ449775.1 | . | . | . | . | . | . | . | . |
| MON-1 | MHOM/ES/1986/BCN16 | DQ449774.1 | . | . | . | . | . | . | . | . |
| MON-1 | MHOM/FR/1997/LSL29 | DQ449773.1 | . | . | . | W | . | . | . | . |
| MON-1 | MHOM/ES/1993/PM1 | DQ449772.1 | . | . | . | . | . | . | . | . |
| MON-1 | MHOM/FR/1995/LPN114 | DQ449771.1 | . | . | . | . | . | . | . | . |
| MON-1 | MHOM/BL/67/ITMAP263 | KU175220.1 | – | . | . | . | . | . | . | . |
| MON-1 | MHOM/TN/80/IPT1 | MF479731 | . | . | . | . | . | . | . | – |
| MON-1 | MHOM/FR/78/LEM75 | MF479732 | . | – | – | – | – | . | . | – |
| MON-1 | Isolate 49u | MF479733 | . | . | . | . | . | . | . | – |
| MON-1 | Isolate 31U | MF479734 | . | . | . | – | – | – | . | – |
| MON-1 | Isolate 791 | MF479735 | . | . | . | . | . | . | . | – |
| MON-1 | Isolate 10816 | MF479736 | . | . | . | . | . | . | . | – |
| MON-1 | Isolate V2921 | MF479737 | . | . | . | . | . | . | . | – |
| MON-11 | MHOM/FR/1980/LEM189 | DQ449783.1 | C | . | . | T | . | . | . | . |
| MON-24 | MHOM/DZ/82/LIPA59 | MF479738 | C | . | . | . | . | . | . | – |
| MON-29 | MHOM/ES/82/BCN1 | MF479739 | C | . | . | T | . | . | . | – |
| MON-29 | MHOM/FR/1996/LEM3249 | DQ449776.1 | C | . | . | W | . | . | . | – |
| MON-72 | MHOM/IT/86/ISS218 | MF479740 | . | . | . | . | . | . | . | – |
| MON-77 | MCAM/ES/86/LEM935 | DQ449797.1 | . | . | . | W | . | . | . | – |
| MON-78 | MHOM/MT/1985/BUCK | DQ449784.1 | C | . | . | . | . | . | . | . |
| MON-81 | MHOM/SD/1962/3Sa | DQ449787.1 | C | G | C | . | . | . | T | T |
| MON 105 | MHOM/ES/2001/LLM1026 | DQ449799.1 | . | . | . | . | . | . | . | . |
| MON-183 | MHOM/ES/1991/LEM2298 | DQ449777.1 | . | . | . | W | . | . | . | . |
| MON-188 | MHOM/IT/1993/ISS800 | DQ449791.1 | C | . | . | . | . | . | . | . |
| MON-198 | MHOM/ES/1988/LLM175 | DQ449788.1 | C | . | . | T | . | . | . | . |
| MON-199 | MHOM/ES/1992/LLM373 | DQ449789.1 | . | . | . | W | . | . | . | . |
| MON-201 | MHOM/IT/93/ISS822 | MF479741 | . | . | . | . | . | . | . | . |
| MON-228 | MHOM/IT/1994/ISS1036 | DQ449790.1 | . | . | . | . | . | . | . | . |
| MON-253 | MHOM/ES/1996/LLM580 | DQ449798.1 | . | . | . | . | A | . | . | . |
| MON-267 | MHOM/SD/1997/LEM3472a | DQ449792.1 | C | G | C | . | . | . | T | T |
| MON-267 | MCAN/SD/2000/LEM3988 | KU175214.1 | – | G | C | . | . | . | T | . |
| MON-309 | ITOB/TR/2005/CUK2 | EU545237.1 | C | . | . | . | . | . | . | . |
| MON-309 | MHOM/TR/2005/CUK1 | EU545236.1 | C | . | . | . | . | . | . | . |
| ni | ITOB/TR/2007/CUK10 | EU545238.1 | C | . | . | . | . | . | . | . |
| ni | MHOM/CN/93/KXG-XU | JX021334.1 | – | . | C | . | . | C | . | . |
| ni | MHOM/CN/94/KXG-LIU | JX021333.1 | – | . | C | . | . | C | . | . |
| non-MON-1 | MHOM/TR/2000/OG-VL | EU545239.1 | . | . | . | . | . | . | . | . |
| ni | Isolate RRR-B | DQ449796.1 | . | . | . | . | . | . | . | . |
| ni | MHOM/PA/78/WR285 | KU175216.1 | – | . | . | . | . | . | . | . |
| ni | Isolate D38 | KU175221.1 | – | . | . | . | . | . | . | . |
| ni | Isolate D33 | KU175219.1 | – | . | . | . | . | . | . | . |
| ni | Isolate D36D | KU175218.1 | – | . | . | . | . | . | . | . |
| ni | Isolate E9D | KU175217.1 | – | . | . | . | . | . | . | . |
| ni | JPCM5 | XM_001468358.1 | . | . | . | . | . | . | . | . |
Zymodeme sequences obtained in this study are in bold
Abbreviation: ni not indicated
Key: . consensus sequence, – sequence not available
aInitially assigned to L. infantum and successively designated L. donovani [18]