Table 8.
Zymodeme | Strain/isolate | GenBank ID | 300 | 392 | 486 | 637 | 798 |
---|---|---|---|---|---|---|---|
MON-1 | MHOM/FR/1978/LEM75 | DQ449737.1 | C | A | G | A | C |
MON-1 | MHOM/FR/1995/LPN114 | DQ449738.1 | . | . | . | . | . |
MON-1 | MHOM/ES/1993/PM1 | DQ449739.1 | . | . | . | . | . |
MON-1 | MHOM/FR/1997/LSL29 | DQ449740.1 | . | . | . | . | . |
MON-1 | MHOM/ES/1986/BCN16 | DQ449741.1 | . | . | . | . | . |
MON-1 | MHOM/PT/2000/IMT260 | DQ449742.1 | . | . | . | . | . |
MON-1 | MHOM/TN/1980/IPT1 | MF462101 | . | . | . | . | . |
MON-1 | MHOM/FR/78/LEM75 | MF462102 | . | – | – | . | . |
MON-1 | Isolate 31u | MF462103 | . | . | . | . | . |
MON-1 | Isolate 791 | MF462104 | . | . | . | . | . |
MON-1 | Isolate 10816 | MF462105 | . | . | – | . | . |
MON-1 | Isolate V2921 | MF462106 | . | . | . | . | . |
MON-1 | Isolate 49u | MF462107 | . | . | . | . | . |
MON-11 | MHOM/FR/1980/LEM189 | DQ449750.1 | . | . | . | . | . |
MON-24 | MHOM/DZ/82/LIPA59 | MF462108 | . | . | . | . | . |
MON-29 | MHOM/ES/81/BCN1 | MF462109 | . | . | . | . | . |
MON-29 | MHOM/FR/1996/LEM3249 | DQ449743.1 | . | . | . | . | . |
MON-72 | MHOM/IT/86/ISS218 | MF462110 | . | . | . | . | . |
MON-78 | MHOM/MT/1985/BUCK | DQ449751.1 | . | . | . | . | . |
MON-81 | MHOM/SD/1962/3Sa | DQ449754.1 | . | . | . | . | . |
MON-136 | MHOM/IT/1990/ISS510 | DQ449766.1 | . | . | A | R | . |
MON-183 | MHOM/ES/1991/LEM2298 | DQ449744.1 | . | . | . | . | . |
MON-188 | MHOM/IT/1993/ISS800 | DQ449758.1 | . | . | . | G | . |
MON-198 | MHOM/ES/1988/LLM175 | DQ449755.1 | . | . | . | . | . |
MON-199 | MHOM/ES/1992/LLM373 | DQ449756.1 | . | . | . | . | . |
MON-201 | MHOM/IT/93/ISS822 | MF462111 | . | . | . | R | . |
MON-228 | MHOM/IT/1994/ISS1036 | DQ449757.1 | . | . | . | . | . |
MON-267 | MHOM/SD/1997/LEM3472a | DQ449759.1 | T | R | . | . | T |
non-MON-1 | MHOM/TR/2000/OG-VL | EU545251.1 | . | . | . | . | . |
ni | MHOM/TR/2005/CUK1 | EU545248.1 | . | . | . | . | . |
ni | ITOB/TR/2005/CUK2 | EU545249.1 | . | . | . | . | . |
ni | ITOB/TR/2007/CUK10 | EU545250.1 | . | . | . | . | . |
ni | MHOM/CN/94/KXG-LIU | JX021373.1 | T | . | . | . | T |
ni | MHOM/CN/93/KXG-XU | JX021374.1 | T | . | . | . | T |
ni | Isolate RRR-B | DQ449763.1 | Y | . | . | . | Y |
Zymodeme sequences obtained in this study are in bold
Abbreviation: ni not indicated
Key: . consensus sequence, – sequence not available
aInitially assigned to L. infantum and successively designated L. donovani [18]