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. 2018 Nov 1;19:790. doi: 10.1186/s12864-018-5169-9

Fig. 4.

Fig. 4

The log odds ratios of the depths at heterozygous SNP positions in the HLA-A gene of patient RK069. The log odds ratios were calculated for a the WGS data and b the TruSight HLA Sequencing Panel data. These log odds ratios correspond to the relative quantities of observed A*26:01:01 SNPs in the tumor sample compared with the normal sample. The red dots indicate the mean values of the log odds ratios, and the vertical lines indicate the 95% confidence intervals