TABLE 1.
Transposition library sequence quantification
| Librarya | Total no. of reads (×106) |
Total no. of hits (×103) |
Mean no. of hits/100 bp |
% of hits in features |
% of intergenic hits |
% of features per hit |
Mean no. of hits per feature |
Mean no. of reads per feature (×103) |
Mean no. of reads per hit (×103) |
Mean no. of reads per hit in feature (×103) |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.7 | 23.8 | 0.17 | 38.18 | 61.82 | 62.46 | 2.2 | 2.2 | 1.1 | 1 |
| 2 | 12.4 | 25.2 | 0.18 | 35.3 | 64.7 | 60.63 | 2.2 | 1.1 | 0.5 | 0.5 |
| 3* | 31.9 | 252.6 | 1.77 | 33.39 | 66.61 | 89.72 | 14.2 | 1.7 | 0.1 | 0.1 |
| 4 | 20.2 | 40.6 | 0.28 | 31.99 | 68.01 | 69.87 | 2.8 | 1.4 | 0.5 | 0.5 |
| 5 | 30.9 | 64.6 | 0.45 | 31.71 | 68.29 | 74.12 | 4.2 | 2.1 | 0.5 | 0.5 |
| 6 | 19.2 | 40.1 | 0.28 | 31.61 | 68.39 | 69.84 | 2.7 | 1.4 | 0.5 | 0.5 |
| 7* | 28.8 | 169 | 1.18 | 33.26 | 66.74 | 85.85 | 9.9 | 1.6 | 0.2 | 0.2 |
| 8 | 26.6 | 37 | 0.26 | 31.07 | 68.93 | 63.9 | 2.7 | 1.8 | 0.7 | 0.7 |
| 9 | 31.3 | 28.1 | 0.20 | 37.25 | 62.75 | 65.47 | 2.4 | 2.4 | 1.1 | 1 |
| 10 | 22.8 | 27.9 | 0.20 | 28.96 | 71.04 | 55.54 | 2.2 | 1.8 | 0.8 | 0.8 |
| 11* | 23.5 | 178.2 | 1.25 | 32.9 | 67.1 | 85.59 | 10.4 | 1.3 | 0.1 | 0.1 |
Asterisk indicates three libraries pooled for subsequent analysis.