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. 2018 Sep 25;19(10):2908. doi: 10.3390/ijms19102908

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© 2018 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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Dynamics of the NEC heterodimers (a) RMSD (root-mean-square deviation) plot of the complete NECs of HCMV (blue), HSV-1 (orange), and PRV (grey). (b) RMSD plot of the pUL53 (pUL31) subdomain of HCMV (blue), HSV-1 (orange), and PRV (grey). (c) RMSD plot of the pUL50 (pUL34) subdomain of HCMV (blue), HSV-1 (orange) and PRV (grey). (d) Overlay of the HCMV NEC starting structure and the twisted structure after 120 ns simulation time. The proteins are coloured according to the scheme established in Figure 1. One of the pUL53 helices is marked by a red ellipse to illustrate the extent of the twist. (e) Plot illustrating the twist in the two simulation runs of HCMV (blue and orange), HSV-1 (grey and yellow), and PRV (green and dark blue). (f) RMSD plot of the complete HCMV NEC in two runs.