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. 2018 Oct 4;19(10):3026. doi: 10.3390/ijms19103026

Table 3.

Longitudinal studies.

Model/Tissue Method Main Findings Reference
Peripheral blood of patients with SCZ (n = 82) Bisulfite conversion + PCR + pyrosequencing • Decreased DNA methylation at CpG13 of HTR1A associated with poorer response to antipsychotics [87]
Peripheral blood from SCZ patients (n = 21) Infinium Human-Methylation450 BeadChip • Clozapine-induced DNA methylation changes in the CREBBP gene were significantly correlated with clinical improvements [88]
Peripheral blood from SCZ patients; good responders (n = 88), poor responders (n = 54) Methylation-specific PCR + mass spectrometry • Seven CpGs at CYP3A4 and CYP2D6 genes were differentially methylated in good vs. poor responders to risperidone therapy [89]
Peripheral blood from SCZ patients n = 20 (12 M/8 F) MeDIP ChIP • Before treatment: nine genes with DMR in male SCZ patients in complete remission after treatment (vs. matched control subjects)
• After treatment: six genes with DMR in male SCZ patients in complete remission after treatment (vs. matched control subjects)
• Before treatment: one gene (M1R181C) with DMR in female SCZ patients in complete remission after treatment (vs. matched control subjects)
• After treatment: one gene (BCOR) with DMR in female SCZ patients in complete remission after treatment (vs. matched control subjects)
[90]
Leukocytes from patients with MDD (n = 108) Bisulfite conversion followed by PCR • Increased of SLC6A4 DNA methylation level associated with impaired treatment response to antidepressants [91]
Whole blood from patients with MDD (n = 50 before treatment and n = 40 after 6 weeks of treatment) and controls (n = 50) Methylation-specific PCR + mass spectrometry • Methylation level of the third CpG site of SLC6A4 gene association with better therapeutic response to antidepressant therapy in patients MD [92]
Whole blood from patients with MDD (n = 94), (Human) Bisulfite conversion + PCR • Increased DNA methylation of SLC6A4 gene associated with better treatment response to escitalopram [93]
Whole blood from patients with MDD, (n = 61) (Human) Bisulfite conversion + PCR • No major influence of mono amino oxidase (MAO-A) gene methylation status on escitalopram response [94]
Peripheral blood of patients with MDD (n = 85) Bisulfite sequencing • Significant association of 668 CpG sites of HTR1A and 1401 CpG sites of HTR1B gene methylation with treatment response to escitalopram [95]
Peripheral blood samples of patients with MDD treated with escitalopram (n = 80) or nortriptyline (n = 33) Bisulfite conversion + PCR • Fourth CpG island hypomethylation of IL-11 gene associated with better response to nortriptyline
• Hypermethylation of fourth CpG island of IL-11 gene associated with better response to escitalopram
[96]

Polymerase Chain reaction (PCR), quantitative PCR (qPCR), Methylated DNA Immunoprecipitation (MeDIP), Chromatin ImmunoPrecipitation (ChIP).