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. 2018 Oct 16;16(10):386. doi: 10.3390/md16100386

Table A3.

Summary of classical rigid docking calculations of the derived analogues compound set over the DYRK1A and Molecular Mechanics/Generalized Born Surface Area (MM/GBSA) calculations of the best posed analogue compounds. Lowercase letters represent the employed halogen group (ag).

DYRK1A
1 2 3 4 5 6 7
Binding Energy R0/R1 a −6.2/−6.2 −8.6/−8.6 −5.9/−5.9 −6.8/−6.8 −6.7/−6.7 −5.7/−5.7 −6/−6
MM/GBSA −37.8422 −15.2733 −30.7518 −31.2535 −18.9387 −20.8203
Binding Energy R0/R1 b −6.5/−6.5 −8.5/−8.5 −7/−7 −7.2/−7.2 −6.6/−6.6 −7/−7 −7.3/−7.3
MM/GBSA −23.7829 −28.0642 −8.4887 −19.4730 −21.8802 −10.2503 −11.8981
Binding Energy R0/R1 c −6.3/−6.3 −8.6/−8.6 −5.9/−5.9 −7.2/−7.2 −6.5/−6.5 −6.9/−6.9 −7.3/−7.3
MM/GBSA −30.2004 −34.1231 −12.1852 −26.5473 −28.3000 −18.7332 −13.2158
Binding Energy R0/R1 d −5.9/−5.9 −8.6/−8.6 −6.7/−6.7 −6.6/−6.6 −6.3/−6.3 −6.5/−6.5 −6.6/−6.6
MM/GBSA −30.8597 −36.1125 −10.3667 −26.3748 −26.9602 −17.1653 −16.4510
Binding Energy R0/R1 e −6.4/−6.4 −8.6/−8.6 −6.5/−6.5 −6.6/−6.6 −6.4/−6.4 −6.6/−6.6 −6.4/−6.4
MM/GBSA −32.8862 −13.5197 −28.9038 −29.6780 −20.0635
Binding Energy R0/R1 f −6.2/−6.2 −8.6/−8.6 −5.8/−5.8 −6.8/−6.8 −6.3/−6.3 −6.4/−6.4 −6.9/−6.9
MM/GBSA −28.9419 −33.0823 −14.5027 −25.4579 −28.4081 −15.8583 −17.0209
Binding Energy R0/R1 g −6.7/−6.7 −8.7/−8.7 −5.8/−5.8 −6.8/−6.8 −6.7/−6.7 −6.1/−6.1 −6.9/−6.9
MM/GBSA −30.3186 −35.5805 −13.4928 −27.1510 −29.6010 −18.0146 −17.3973

To avoid false positives, each docking calculation was performed twice (R0/R1). All energies values are kcal/mol.