Table 2.
DisEMBL | IUPred | VSL2 | Espritz | PONDR-FIT | MFDp2 | IUPred2 | AUCpreD | This Work | |
---|---|---|---|---|---|---|---|---|---|
Sens | 0.454 | 0.656 | 0.82 | 0.529 | 0.728 | 0.78 | 0.647 | 0.609 | 0.811 ± 0.007 |
Spec | 0.915 | 0.872 | 0.735 | 0.932 | 0.856 | 0.857 | 0.87 | 0.908 | 0.856 ± 0.006 |
Acc | 0.784 | 0.811 | 0.759 | 0.818 | 0.82 | 0.835 | 0.811 | 0.823 | 0.844 ± 0.003 |
Acc-b | 0.684 | 0.764 | 0.777 | 0.731 | 0.792 | 0.819 | 0.761 | 0.759 | 0.834 ± 0.001 |
MCC | 0.424 | 0.532 | 0.507 | 0.521 | 0.569 | 0.615 | 0.53 | 0.53 | 0.639 ± 0.003 |
F1 | 0.544 | 0.663 | 0.659 | 0.622 | 0.696 | 0.729 | 0.66 | 0.66 | 0.747 ± 0.002 |
AUC_ROC | 0.779 | 0.824 | 0.841 | 0.888 | 0.857 | 0.88 | 0.822 | 0.872 | 0.9 ± 0.002 |
AUC_PR | 0.617 | 0.673 | 0.642 | 0.754 | 0.695 | 0.622 | 0.672 | 0.72 | 0.789 ± 0.005 |
Note Bene. The new strategy was optimized five times under five-fold cross-validation. Therefore, the performance was also tested in the independent test dataset five times. The results shown in the table is the average of all five times. The highest value in each of these measures is in bold and highlighted (red).