Table 2.
Known miRNA families and their abundances identified from JAAS-BR and JAAS-BS libraries.
| Family | Members | miRNA reads | Total reads | Ratio | |
|---|---|---|---|---|---|
| JAAS-BR | JAAS-BS | (JAAS-BS/JAAS-BR) | |||
| Conserved miRNA | |||||
| miR156/157 | 14 | 40 | 40 | 80 | 1.00 |
| miR159 | 12 | 2,305 | 1,840 | 4,145 | 0.80 |
| miR160 | 4 | 29 | 17 | 46 | 0.59 |
| miR162 | 4 | 424 | 358 | 782 | 0.84 |
| miR164 | 7 | 88 | 66 | 154 | 0.75 |
| miR165/166 | 14 | 2,818 | 2,359 | 5,177 | 0.84 |
| miR167 | 8 | 321 | 309 | 630 | 0.96 |
| miR168 | 3 | 31 | 19 | 50 | 0.61 |
| miR169 | 8 | 553 | 256 | 809 | 0.46 |
| miR171 | 8 | 46 | 33 | 79 | 0.72 |
| miR172 | 8 | 55 | 33 | 88 | 0.60 |
| miR173 | 1 | 0 | 1 | 1 | — |
| miR319 | 10 | 1,883 | 1,364 | 3,247 | 0.72 |
| miR390 | 5 | 104 | 83 | 187 | 0.80 |
| miR393 | 2 | 0 | 2 | 2 | — |
| miR394 | 3 | 3 | 1 | 4 | 0.33 |
| miR395 | 8 | 17 | 16 | 33 | 0.94 |
| miR396 | 11 | 8,218 | 9,997 | 18,215 | 1.22 |
| miR397 | 1 | 2 | 2 | 4 | 1.00 |
| miR398 | 3 | 105 | 76 | 181 | 0.72 |
| miR399 | 6 | 1,984 | 883 | 2,867 | 0.45 |
| miR408 | 2 | 4 | 0 | 4 | 0.00 |
| miR482 | 4 | 4 | 2 | 6 | 0.50 |
| miR535 | 1 | 1 | 0 | 1 | 0.00 |
| Non-conserved miRNA | |||||
| miR403 | 1 | 0 | 1 | 1 | — |
| miR414 | 1 | 2 | 0 | 2 | 0.00 |
| miR477 | 6 | 92 | 50 | 142 | 0.54 |
| miR529 | 1 | 0 | 2 | 2 | — |
| miR827 | 1 | 138 | 84 | 222 | 0.61 |
| miR845 | 5 | 69 | 67 | 136 | 0.97 |
| miR854 | 1 | 1 | 0 | 1 | 0.00 |
| miR858 | 1 | 156 | 18 | 174 | 0.12 |
| miR894 | 1 | 226 | 184 | 410 | 0.81 |
| miR1511 | 2 | 80 | 61 | 141 | 0.76 |
| miR1863 | 2 | 39 | 36 | 75 | 0.92 |
| miR2111 | 6 | 59 | 71 | 130 | 1.20 |
| miR2118 | 1 | 1 | 0 | 1 | 0.00 |
| miR3630 | 1 | 1 | 1 | 2 | 1.00 |
| miR5021 | 1 | 3 | 5 | 8 | 1.67 |
| miR5293 | 1 | 1 | 0 | 1 | 0.00 |
| miR5298 | 1 | 0 | 1 | 1 | — |
| miR5654 | 1 | 1 | 0 | 1 | 0.00 |