Figure 3.
Snapshot from unbiased molecular dynamics simulations showing contact between the carboxylate group of betulinic acid and the catalytic Zn ion of BaP1. Betulinic acid and indicated residues of BaP1 are are shown in a bonds representation with their carbon atoms colored cyan and gray, respectively. H, N, and O atoms are white, blue, and red. The Zn ion is shown as a gray sphere. The protein secondary structure is represented in gray.