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. 2018 Oct 29;9:2578. doi: 10.3389/fmicb.2018.02578

Table 1.

List or primers used for the detection of T3SS and T6SS effectors.

Secretion system Gene Primers
Name Sequences
T3SS pscC F pscC 5′-ccaggcctgccttacgactat-3′
R pscC 5′-tcgtagtaccagcccgaggtt-3′
exoS R exoS 5′-atgccggtgtagagaccaag-3′
F exoS 5′-aggtcagcagagtatcggc-3′
exoT R exoT 5′-tcgatcgatatctcgctgac-3′
F exoT 5′-tgaacaggtcgtgaagacc-3′
exoU R exoU 5′-acgtaacagagctacgttgg-3′
F exoU 5′-ttgatcatcagcagttactcg-3′
exoY R exoY 5′-tgccatagaatccgtcctcg-3′
F exoY 5′-atgacctcttcctggtagcg-3′
H1-T6SS tssB1 F tssB1 5′-gtgcagatcgagtacgacg-3′
R tssB1 5′-tcttgccgtccatgtaggt-3′
tse1 R tse1 5′-agggagtagacgtagtag-3′
F tse1 5′-aagtacccgatgtgctggtg-3′
tse2 R tse2 5′-acgaagttgtccagttgg-3′
F tse2 5′-ttaaggtgaagcaggacagc-3′
tse3 R tse3 5′-ttgctgtacttggtgacgg-3′
F tse3 5′-atccagggtccgttcag-3′
H2-T6SS tssB2 F tssB2 5′-atggccaaagaaggctcggt-3′
R tssB2 5′-tggtgcttggccaggacctc-3′
pldA R pldA 5′-tgtcgatcaccacggatttc-3′
F pldA 5′-tatgacttcgaaaccatgctcg-3′
H3-T6SS tssB3 F tssB3 5′-gtacgcagcacaagctggac-3′
R tssB3 5′-ttgaccgggtcgaagtcctc-3′
pldB R pldb 5′-ttcgatgttgttttcctggcc-3′
F pldb 5′-aagaccacctacgacatgatg-3′

genes encoded a structural protein of the secretion system (T3SS or T6SS).