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. 2018 Oct 1;9(20):3812–3823. doi: 10.7150/jca.26816

Table 3.

Collaborative evaluation of the four multiplex cfDNA RMs (RMs L1-L4) by NGS

RMs Gene AA Change Lab1 Lab2 Lab3 Lab4 Lab5 Lab6 Lab7 Lab8
L1 KRAS G12S 2.92 3.07 2.26 2.11 2.83 2.35 2.22 1.30
KRAS G12C 2.13 2.82 2.22 3.53 ND 3.02 2.58 2.05
KRAS G12D 4.12 0.79 1.94 2.80 ND 2.31 2.20 1.90
KRAS G12A 3.30 3.08 2.84 3.20 2.94 3.38 3.40 2.28
KRAS G12V 2.68 2.02 2.23 3.27 ND 3.09 2.40 2.51
KRAS G13D 2.74 2.89 2.59 2.18 2.64 2.71 2.05 2.20
NRAS G12D 2.42 1.90 / 2.45 1.76 1.89 1.91 1.92
NRAS Q61R 2.93 2.40 / 2.86 ND 1.76 2.66 1.38
NRAS Q61K 4.01 5.50 / 5.13 5.13 5.28 4.60 5.02
PIK3CA H1047R 3.54 / 2.14 / 2.59 2.64 2.37 2.49
BRAF V600E 2.16 1.56 1.64 1.81 1.70 2.47 2.43 1.79
L2 KRAS G12S 1.22 1.50 0.93 1.66 ND 1.69 1.03 0.74
KRAS G12C 1.83 1.90 1.53 2.20 1.56 1.53 2.04 1.57
KRAS G12D 0.91 0.63 1.62 1.91 ND 1.60 1.37 1.32
KRAS G12A 1.33 1.22 1.64 1.72 1.94 1.63 1.69 0.91
KRAS G12V 1.42 1.11 1.56 1.78 ND 1.56 1.34 0.98
KRAS G13D 0.57 1.59 1.44 1.49 0.83 1.53 1.26 0.54
NRAS G12D 1.44 0.77 / 0.71* 1.37 0.83 1.38 0.71
NRAS Q61R 1.48 1.59 / 1.22 ND 1.06 1.13 0.57*
NRAS Q61K 2.64 2.69 / 2.23 1.61 3.22 2.63 2.02
PIK3CA H1047R 0.87 / 1.47 / 1.53 1.58 1.27 1.15
BRAF V600E 1.15 0.93 0.93 0.76 0.66 1.34 1.06 0.89
L3 KRAS G12S 0.42 0.79 0.63 1.31 ND 0.73 0.87 0.74
KRAS G12C 1.83 1.90 1.53 2.20 1.56 1.53 2.04 0.52*
KRAS G12D 1.01 0.33* 0.71 0.53* ND 1.07 0.60 0.96
KRAS G12A 0.92 0.90 0.60 0.74 ND 0.85 0.57 0.64
KRAS G12V 0.31 0.58 0.57 0.61 * 1.08 1.16 0.80 0.96
KRAS G13D 0.89 0.85 0.61 0.84 0.75 0.38 0.81 0.50
NRAS G12D 0.90 0.59 / 0.77 0.38 0.58 0.60 0.52
NRAS Q61R 1.54 0.86 / 0.47* ND 0.59 0.69 1.07
NRAS Q61K 1.51 1.60 / 0.89 * 1.61 1.53 1.19 1.08
PIK3CA H1047R 0.58 / 0.43 / 0.70 0.61 0.62 0.92
BRAF V600E 0.52 0.81 0.24 0.49 * 0.45 0.76 0.92 0.42
L4 KRAS G12S 0.38 0.12* 0.13 ND ND 0.08* 0.35 0.29*
KRAS G12C 0.10 * 0.20* 0.29 ND 0.31 0.28 0.29 0.35*
KRAS G12D 0.76 ND 0.29 0.19* 0.40 0.18 * 0.06 ND
KRAS G12A 0.10* ND 0.09 0.19* ND 0.12 0.00 ND
KRAS G12V 0.10 0.25* 0.13 ND ND 0.16 0.19 0.07*
KRAS G13D 0.31* ND 0.02* 0.18 * ND 0.11* 0.09 0.45
NRAS G12D 0.18 0.06* / ND 0.13 0.03* 0.19* 0.23*
NRAS Q61R 0.09* 0.12* / ND 0.07* 0.01* 0.14 0.05*
NRAS Q61K 0.94 ND / ND 0.18 0.23 0.12 ND
PIK3CA H1047R 0.45 / 0.11 / ND 0.14 0.15 0.13*
BRAF V600E 0.45 0.08* 0.10* ND ND 0.21 0.15* 0.15*

Note: The data was presented as average of two or three repetitions; /, not applicable in the panel; ND, not detected; *, different result from repetitions