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. 2018 Aug 27;210(2):477–497. doi: 10.1534/genetics.118.301267

Figure 1.

Figure 1

Correlation between actual and predicted heights as a function of the number of SNP hits activated in the predictor. While difficult to visually separate, each line represents the training of a predictor using 453k individuals. Correlation is computed on five separate nonoverlapping sets of 5k individuals not used in training. The phase transition region (roughly, 10<ln(λ)<12) corresponds to rapid growth in correlation on this graph, with number of hits growing from near 0 to >5000. The correlation and penalization values given in the lower righthand corner are the average of a set of LASSO runs; each run generates a slightly different value (even, a slightly different beta vector).

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