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. 2018 Nov 2;6:e5874. doi: 10.7717/peerj.5874

Table 1. The selected proteins with differential accumulation during seed ageing compared with unaged seeds.

Protein accession Protein description Regulated type Ratio Stage MW [kDa]
Enzyme activity and regulation
A0A1D5YNU4 alpha-amylase isozyme 3A Up 1.43,1.70 YM28,YM6 52.36
W5FHN7 alpha-amylase isozyme 3A Up 2.04,2.73 YM28,YM6 47.57
A0A1D5YFA7 Beta-amylase Up 1.51 YM6 55.32
A0A1D5XXC9 Beta-amylase Up 1.54 YM6 58.93
A0A1D5XGF4 Beta-amylase Up 1.54 YM6 56.77
W5B347 beta-glucosidase Up 1.22,1.75 YM28,YM6 57.25
W5G0E6 proteasome subunit alpha type-3 Up 1.27 YM6 27.17
W5ENN5 proteasome subunit beta type-4-like Up 1.27 YM6 27.02
A0A1D5XZ64 proteasome subunit alpha type-5-like Up 1.22 YM6 25.88
P01083 alpha-amylase inhibitor 0.28 Down 0.72 YM6 16.80
Q43723 trypsin/alpha-amylase inhibitor CMX1/CMX3 Down 0.81 YM6 13.83
P16159 Alpha-amylase/trypsin inhibitor CM16 Down 0.54 YM6 15.78
A0A1D5UB33 alpha-amylase/trypsin inhibitor CM1 Down 0.72 YM6 21.49
A0A1D5Y0V2 alpha-amylase/trypsin inhibitor CM3 Down 0.57 YM6 17.31
P16851 Alpha-amylase/trypsin inhibitor CM2 Down 0.73 YM6 15.46
P17314 Alpha-amylase/trypsin inhibitor CM3 Down 0.65 YM6 18.22
A0A1D5SLP0 subtilisin-chymotrypsin inhibitor Down 0.49 YM6 9.36
Nutrient reservoir activity
D6QZM5 avenin-like b6 Down 0.83 YM45 32.35
A0A1D6CWE4 avenin-like b6 Down 0.71 YM6 20.58
D2KFH1 avenin-like a1 Down 0.63 YM6 18.92
A0A1D6CWE1 avenin-like a1 Down 0.60 YM6 21.89
P0CZ08 avenin-like a1 Down 0.59 YM6 19.25
M9TGF7 gamma-gliadin Down 0.58 YM6 37.16
M9TK56 gamma-gliadin Down 0.61 YM6 41.20
J7HT09 alpha-gliadin A-III-like Down 0.51 YM6 32.87
P04728 Alpha/beta-gliadin MM1-like Down 0.49 YM6 21.52
A0A1D5S109 gamma-hordein-3-like Down 0.29 YM6 23.67
A0A1D5T3T7 gamma-hordein-3-like Down 0.39 YM6 36.42
W5BE38 Oleosin Down 0.68,0.59 YM45,YM6 16.31
A0A1D5UJY0 Oleosin Down 0.68,058 YM45,YM6 18.22
A0A1D5ZZ07 Oleosin Down 0.83 YM6 16.90
A0A1D6CX50 Acyl-coenzyme A oxidase Up 1.24 YM6 73.97
Electron transport and signal transduction
A0A1D5WWR8 putative cytochrome c oxidase subunit Up 1.25 YM6 8.99
Q6KCK6 calcium-dependent protein kinase 1 Up 1.20 YM6 58.41
G5DFC5 14-3-3 protein Up 1.24 YM6 29.97
L0GED8 14-3-3 protein Up 1.32 YM6 29.27
Energy and metabolism
W5BEP1 ATP synthase subunit d Down 0.78 YM6 19.55
W5GLU0 ATP synthase subunit o Down 0.82 YM6 25.57
A0A1D6BD14 Glyceraldehyde-3-phosphate dehydrogenase Down 0.78 YM6 43.73
A0A1D5ST38 Malate dehydrogenase Down 0.81 YM6 35.48
A3KLL4 Malate dehydrogenase Down 0.83 YM6 35.49
A0A1D6BI29 Succinate dehydrogenase Down 0.76 YM6 30.98
W5H1Q1 Citrate synthase Up 1.21 YM28 52.56
A0A1D6RKR9 Isocitrate dehydrogenase Up 1.28 YM6 46.32
A0A1D5UPI1 Glucose-6-phosphate 1-dehydrogenase Up 1.50 YM6 57.82
W5FY62 Glucose-6-phosphate isomerase Up 1.22 YM6 67.06
A0A1D5UP90 6-phosphofructokinase Up 1.25 YM6 50.73
W5G100 Pyruvate kinase Up 1.49 YM6 57.42
Defense/stress response
A0A1D5S2L6 peroxidase Down 0.71 YM28 37.48
A0A1D5WX80 peroxidase Down 0.80 YM6 35.76
A0A1D5TMJ6 peroxidase Down 0.78,0.81 YM28,YM6 29.77
A0A1D5TAW7 Superoxide dismutase Down 0.78 YM6 21.19
A0A1D5XFA3 L-ascorbate peroxidase Down 0.72 YM6 26.09
Q10464 Puroindoline-B Down 0.75 YM6 16.79
W5D2I6 Non-specific lipid-transfer protein Down 0.80,0.78,0.44 YM45,YM28,YM6 11.23
A0A1D5WSS8 Non-specific lipid-transfer protein Down 0.77,0.43 YM45, YM6 14.81
Q1KMV0 Non-specific lipid-transfer protein Down 0.79,0.77,0.46 YM45,YM28,YM6 11.12
W5D2I6 Non-specific lipid-transfer protein Down 0.80,0.78,0.44 YM45,M28,YM6 11.23
A0A1D5T8E9 Non-specific lipid-transfer protein Down 0.44 YM6 21.11
A0A1D5ZPD0 Non-specific lipid-transfer protein Down 0.45 YM6 12.13
P24296 Non-specific lipid-transfer protein Down 0.45 YM6 11.90
A0A1D5XQK2 Non-specific lipid-transfer protein Down 0.46 YM6 11.97
Q2PCD2 Non-specific lipid-transfer protein Down 0.46 YM6 12.25
P82901 Non-specific lipid-transfer protein Down 0.47 YM6 7.05
A0A1D5UG33 Non-specific lipid-transfer protein Down 0.51 YM6 18.44
A0A1D5Y7A7 Non-specific lipid-transfer protein Down 0.53 YM6 11.86
A0A1D5SG95 Non-specific lipid-transfer protein Down 0.62 YM6 12.61
C3UZE5 Pathogenesis-related protein 1-like Up 1.36 YM28 17.64
A0A1D5YCS8 pathogenesis-related protein 1-like Up 1.85,1.76 YM28,YM6 26.67
P20159 defensin-like protein 2 Up 1.35 YM28 5.15
O64393 Wheatwin-2 Up 1.23 YM28 15.87
P30110 Glutathione S-transferase 1 Up 1.33,1.70 YM28,YM6 25.83
Q8RW01 Glutathione S-transferase Up 1.20 YM6 25.20
W5G485 Glutathione synthetase Up 1.27 YM6 52.9
Other proteins
Q43312 protein H2A Down 0.76,0.56 YM28,YM6 13.93
W5E8H6 histone H2B Down 0.83 YM28 16.31
W5F9T2 histone H2B Down 0.83 YM28 16.49
W5EBF3 histone H2B Down 0.59 YM6 33.13
W5C8N6 40S ribosomal protein S6 Down 0.56 YM6 28.46
A0A1D5UFM0 40S ribosomal protein S12 Down 0.72 YM6 15.23
Q7X748 60S ribosomal protein L3 Down 0.77 YM6 44.62
W5FSM8 60S ribosomal protein L17-1 Down 0.75 YM6 19.49
A0A1D5X7C5 Protein disulfide-isomerase Down 0.74 YM6 53.25
A0A1D5Y681 Protein disulfide-isomerase Down 0.76 YM6 56.02
A0A1D5XQP7 Protein disulfide-isomerase Down 0.83 YM6 54.19