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. 2018 Oct 29;9:2598. doi: 10.3389/fmicb.2018.02598

Table 1.

OTUs identified at 97% similarity, species richness estimate (Chao1), diversity index (inverse Simpson) and coverage for 16S rRNA sequencing of dairy samples from Bola de Ocosingo cheese production.

Manufacturer Season Sample Reads OTUs Chao1 Inverse Simpson Good’s coverage
A Dry Milk 7984 217 295.96 (259.19–364.80) 12.97 (12.43–13.56) 99.16%
Curd 2186 39 73 (49.10–153.42) 3.89 (3.77–4.01) 99.22%
Cheese 50 2006 30 35 (31.16–51.57) 2.80 (2.69–2.92) 99.5%
Cheese 110 4014 24 36 (26.66–78.20) 1.12 (1.1–1.13) 99.78%
Rainy Milk 12267 311 505.24 (430.29–627.28) 8.22 (7.98–8.49) 99.01%
Curd 30084 82 122.07 (98.95–176.73) 1.36 (1.35–1.37) 99.89%
Cheese 50 21104 77 111.36 (90.39–165.16) 2.48 (2.46–2.50) 99.87%
Cheese 110 19618 162 279.30 (223.46–385.86) 4.22 (4.17–4.27) 99.65%
B Dry Milk 3034 19 26 (20.34–55.54) 1.21 (1.19–1.24) 99.77%
Curd 2054 35 53.20 (40.1–99.89) 3.58 (3.48–3.69) 99.32%
Cheese 50 2725 56 96.63 (71.02–165.89) 1.52 (1.47–1.58) 99.05%
Cheese 110 3563 24 27 (24.5–41.95) 1.41 (1.38–1.45) 99.83%
Rainy Milk 6654 26 27.50 (26.15–41.08) 5.21 (5.06–5.36) 99.95%
Curd 1834 46 63 (51.34–100.16) 2.14 (2.03–2.27) 99.07%
Cheese 50 4828 81 100.71 (88.32–134.09) 5.12 (4.91–5.34) 99.50%
Cheese 110 8410 145 291.30 (223.32–418.28) 5 (4.87–5.12) 99.08%
C Dry Milk 2388 76 106.67 (87.15–160.35) 4.74 (4.52–4.99) 99.00%
Curd 7223 77 93.87 (83.15–123.26) 2.44 (2.38–2.50) 99.68%
Cheese 50 3335 46 69.75 (53.99–116.61) 1.84 (1.78–1.91) 99.4%
Cheese 110 2180 50 100.14 (68.47–186.09) 1.46 (1.41–1.52) 98.76%
Rainy Milk 3589 92 119.60 (102.11–167.35) 9.64 (9.21–10.11) 99.33%
Curd 2341 41 92 (55.99–214.50) 2.12 (2.03–2.23) 99.23%
Cheese 50 3386 41 53.75 (45.14–80.28) 1.53 (1.49–1.58) 99.47%
Cheese 110 3810 26 31.63 (27.32–50.06) 1.18 (1.16–1.2) 99.74%