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. 2018 Oct 30;6:500. doi: 10.3389/fchem.2018.00500

Table 1.

Prediction of OsAOC homo-oligomer structures.

No Template* Oligomeric state Structure similarity
OsAOC# OsAOC(I) OsAOC(II) OsAOC(III)
1 2BRJ Trimeric 0.9834 0.9133 0.8461 0.7966
2 4H6B Trimeric 0.9670 0.8982 0.8315 0.7828
3 4REV Trimeric 0.6398 0.6092 0.5805 0.5500
4 5BU3 Dimeric 0.6050 0.5719 0.5319 0.5577
*

PDB accession code: 2BRJ (AtAOC2), 4H6B (PpAOC1), 4REV (Dirigent protein DRR206) and 5BU3 (Diels-Alderase PyrI4). Structure similarity is measured by TM (Template-based oligomer modeling)-align as described in Lee et al. (2013). It ranges from 0 (totally different) to 1 (identical).

#

Monomer subunit was generated by PyMol (N-terminal TP was automatically removed by SWISS-Model).

Monomer subunit was generated using the intensive mode of Phyre2 (Figure S6).