Table 2.
qPCR primers.
| Primer | Sequence | Efficiency | Reference |
|---|---|---|---|
| ompF-F | CGT AAC TCT GGT GTT GCT ACT T | 1.843 | This study |
| ompF-R | AGT CGC TAT GTG CTG ATT GG | ||
| kdgN-F | CCT GCG TTA TCG TCC TTT CTA C | 1.428 | This study |
| kdgN-R | CAG CAC GCT GGT AAT GGT ATA G | ||
| ompR-F | GCT CGA TTG ATG TGC AGA TTT C | 1.904 | This study |
| ompR-R | ACA AAG ACG TAG CCC AAC C | ||
| envZ-F | CTG GCG GAG TCG ATC AAT AA | 1.652 | This study |
| envZ-R | GCC ACT TCC ATC TGC ATT TC | ||
| spy-F | CGG AAG GCG TAG TCA ATC AA | 1.943 | This study |
| spy-R | TTT CTG TTC CGG CGT CAA | ||
| degP-F | CCA GAT TGT CGA ATA CGG AGA G | 1.733 | This study |
| degP-R | GCA TCC ACT TTC ATG GCT TTA G | ||
| opgG-F | CCG GAA CAG GCT TAT GTG AT | 1.774 | This study |
| opgG-R | AAT CGA CCA GGA ATG CAG TAG | ||
| opgH-F | GGA ACT GGC GAT AGC TTT GT | 1.547 | This study |
| opgH-R | CCA CTC CGC CGT ATG ATT TAG | ||
| flhD-F | TCG GTT GGG TAT CAA TGA AGA A | 1.815 | This study |
| flhD-R | TCA CTG AAG CGG AAA TGA CAT A | ||
| fliC-F | CAC GGC TCA TGT TGG ATA CT | 1.676 | This study |
| fliC-R | CA TTG ACA ACC TGA GCA ACA C | ||
| ipxC-F | AAA TCC GTG CGT GAT ACC AT | 1.862 | Hommais et al., 2011 |
| ipxC-R | CAT CCA GCA GCA GGT AGA CA | ||