Table 1. . Genes based on genome-wide association study hits.
Gene | Chromosome | Medication | SNP | Number of positive studies (total n) | Number of negative studies |
---|---|---|---|---|---|
CHRNA5–A3–B4 | 15 | NRT | rs588765 | 2 (3776) | 2 |
rs16969968 | 1 (328) | 4 | |||
rs16969968*rs680244 | 1 (1073) | 0 | |||
rs1051730 | 1 (2633) | 3 | |||
rs2036527 | 1 (1143) | 0 | |||
rs680244 | 0 | 1 | |||
rs578776 | 0 | 5 | |||
rs2229961, rs12914008, rs3813567, rs680244, rs8192475 | 0 | 1 | |||
Bupropion | rs16969968*rs680244 | 1 (1073) | 0 | ||
rs16969968, rs578776 | 0 | 2 | |||
rs588765, rs2036527, rs2229961, rs1051730, rs12914008, rs3813567, rs680244, rs8192475 | 0 | 1 | |||
Varenicline | rs16969968 | 0 | 3 | ||
rs578776 | 0 | 2 | |||
rs588765, haplotype rs16969968 and rs588765 | 0 | 1 | |||
Selegiline | rs3813567 | 1 (231) | 0 | ||
rs680244, rs16969968, rs578776, rs1051730, rs8192475, rs12914008 | 0 | 1 | |||
CYP2A6 | 19 | NRT | Slow/Fast (genotype-based metric) | 1 (709) | 0 |
Bupropion | Slow/Fast | 0 | 1 | ||
CYP2A6-B6 | NRT | rs4105144, rs6474412 | 0 | 1 | |
Varenicline | rs4105144, rs6474412 | 0 | 1 | ||
DBH | 9 | NRT | 1368DBH A | 1 (755) | 0 |
rs77905 | 0 | 1 | |||
Bupropion | rs77905 | 0 | 1 | ||
CHRNA4 | 20 | Varenicline | rs1044396 | 1 (483) | 0k |
Table includes only studies with efficacy outcome (abstinence or relapse).
Table includes genes that have GWAS hits and at least one positive gene x drug interaction study.
GWAS: Genome-wide association study; NRP: Nicotine replacement therapy.