Table 1.
Sample name | Cluster | Pfldh | Microscopy | RDT | P. vivax–nested 18s rRNA PCR | P. vivax by RT-PCR | P. vivax by Sanger sequencing | Duffy −33 T:C mutation |
---|---|---|---|---|---|---|---|---|
B5A7N | 69 | N | N | N | P | P | P | P |
J6V8T | 69 | P | P | N | P | P | P | P |
M2B5U* | 69 | P | N | P | P | P | P | P |
T6B8J | 69 | P | P | P | P | P | P | P |
Z6W9M | 69 | P | N | P | P | P | P | P |
X3M5S* | 144 | P | N | N | P | N | P | P |
Q8J6O | 144 | N | N | N | P | P | P | P |
D9U3K | 144 | N | N | N | P | P | P | P |
G0R3B | 238 | P | P | P | P | N | N | P |
U1P9U* | 238 | P | P | P | P | P | N | P |
O6Y4X | 238 | N | N | N | P | P | P | P |
P8A6E* | 298 | P | N | P | P | N | P | P |
I4G3V | 298 | P | N | P | P | P | P | P |
N4M7L | 298 | N | N | P | P | P | P | P |
DHS = Demographic Health Survey; pfldh = P. falciparum lactate dehydrogenase; RDT = rapid diagnostic test; * = index cases; P = positive; N = negative. The columns above provide information on the DHS cluster the case was identified in, whether the case was coinfected with Plasmodium falciparum as identified with real-time PCR for the pfldh gene, and whether the patient was considered positive for malaria by microscopy and RDT. In addition, each isolate has results for nested 18s rRNA P. vivax PCR, P. vivax real-time PCR, and P. vivax Sanger sequencing. Finally, the host genotype was sequenced for the −33 T:C mutation that predicts the Duffy-negative phenotype.3