Table 1.
Proteina | Most frequent values of single-pore conductance states with frequency of occurrencea | Most frequent values of lifetimes with frequency of occurrenceb | Overall membrane activity (pA/s)c | |||
---|---|---|---|---|---|---|
G1 (pS) | G2 (pS) | G3 (pS) | τ1 (s) | τ2 (s) | ||
RtxA | 38.4 ± 57.4 (10%) | 210.7 ± 66.3 (10%) | 419.5 ± 74.3 (80%) | 0.24 ± 0.06 (79%) | 2.12 ± 0.48 (21%) | 8.3 |
proRtxA | 44.8 ± 72.7 (28%) | 227.4 ± 99.2 (17%) | 433.8 ± 83.3 (55%) | 0.23 ± 0.16 (78%) | 4.11 ± 0.11 (22%) | 1.1 |
aSingle-pore conductance states of RtxA and proRtxA (1 nM) were determined in 150 mM KCl, 10 mM Tris-HCl (pH 7.4) and 2 mM CaCl2 at 25 °C with an applied voltage of 50 mV. The most frequent values of three well-distinguishable single-pore conductance states (G1, G2 and G3) for each protein ± S.D. (half-width at half maximum) are shown. The percentage of the frequency of occurrence for each single-pore conductance state is shown in parentheses
bFor lifetime determination, the kernel density estimation of dwell times (of ~400 individual pore openings) was fitted with a double-exponential function. The error estimates of lifetimes were obtained by bootstrap analysis. The most frequent values of two well-distinguishable lifetimes (τ1 and τ2) for each protein ± S.D. are shown. The percentage of the frequency of occurrence for each lifetime is given in parentheses
cThe overall membrane activity of RtxA and proRtxA was determined in asolectin membranes under the same conditions as in (a) for 5 min and reflects the number of pore-forming molecules in the membrane, conductance (size) and lifetime of single pores, and the frequency of the formation of pores by the proteins