Table 8.

Accuracy comparisons on validation datasets.

Dataset Name	Samples	DNN-PPI	SAE	GBDT	Pan et al.
2010 HPRD	8008	0.9789	0.9205	0.9663	0.8816
DIP	4514	0.9433	0.8773	0.9465	0.8872
HIPPIE HQ	25,701	0.9608	0.8623	0.9415	0.8301
HIPPIE LQ	173,343	0.9340	0.8105	0.9180	—
inWeb_inbiomap HQ	128,591	0.9307	0.8512	0.9284	—
inWeb_inbiomap LQ	368,882	0.9280	0.8187	0.9028	—