Table 5.
Detailed prediction results for each protein on the independent test dataset (BID18).
| PDB ID | GTB | RF | SVM | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TP | FP | TN | FN | TP | FP | TN | FN | TP | FP | TN | FN | ||
| 1CDL_A | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | |
| 1CDL_E | 5 | 3 | 1 | 0 | 5 | 1 | 3 | 0 | 5 | 3 | 1 | 0 | |
| 1DVA_H | 0 | 4 | 7 | 1 | 0 | 4 | 7 | 1 | 0 | 4 | 7 | 1 | |
| 1DVA_X | 3 | 3 | 4 | 1 | 4 | 2 | 5 | 0 | 4 | 3 | 4 | 0 | |
| 1DX5_N | 1 | 1 | 13 | 2 | 1 | 2 | 12 | 2 | 2 | 3 | 12 | 0 | |
| 1EBP_A | 3 | 0 | 1 | 0 | 3 | 0 | 1 | 0 | 3 | 0 | 1 | 0 | |
| 1EBP_C | 1 | 3 | 1 | 0 | 1 | 1 | 3 | 0 | 1 | 0 | 4 | 0 | |
| 1ES7_A | 1 | 3 | 0 | 0 | 0 | 3 | 0 | 1 | 1 | 3 | 0 | 0 | |
| 1FAK_T | 2 | 5 | 14 | 0 | 2 | 5 | 14 | 0 | 2 | 7 | 12 | 0 | |
| 1FE8_A | 0 | 3 | 1 | 0 | 0 | 3 | 1 | 0 | 0 | 3 | 1 | 0 | |
| 1FOE_B | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | |
| 1G3I_A | 6 | 0 | 0 | 0 | 5 | 0 | 0 | 1 | 6 | 0 | 0 | 0 | |
| 1GL4_A | 4 | 1 | 1 | 1 | 3 | 2 | 0 | 2 | 3 | 1 | 1 | 2 | |
| 1IHB_B | 0 | 2 | 2 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 2 | 0 | |
| 1JAT_A | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | |
| 1JAT_B | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |
| 1JPP_B | 0 | 2 | 3 | 2 | 1 | 3 | 2 | 1 | 2 | 5 | 0 | 0 | |
| 1MQ8_B | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | |
| 1NFI_F | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | |
| 1NUN_A | 0 | 2 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 2 | 1 | 0 | |
| 1UB4_C | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | |
| 2HHB_B | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | |