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. 2018 Aug 16;26(11):2604–2616. doi: 10.1016/j.ymthe.2018.08.010

Table 1.

List of sgRNA Target Sites in Exons 46 to 58

sgRNA No. Exon No. Strand sgRNA Target Sequences, Excluding PAM (5′–3′) sgRNA Target Sequence Position PAM Nucleotide Position Cut Sites in the DMD Gene Cut Sites in the Amino Acid Sequence sgRNA Used in the Formation of the Hybrid Exon
1 46 sense TTCTCCAGGCTAGAAGAACAA 1407207–1407227 1407228–1407233 6624 – 6225 2208 GAA (Glu): 2209 CAA (Gln) 46–51; 46–53
2 46 antisense CTGCTCTTTTCCAGGTTCAAG 1407312–1407332 1407306–1407311 6714 –6715 2238 CTT (Leu): 2239 GAA (Glu) 46–53
3 47 sense GTCTGTTTCAGTTACTGGTGG 1409686–1409706 1409707–1409712 6769 –6770 2257 G:TG (Val) 47–58
4 47 antisense TCCAGTTTCATTTAATTGTTT 1409736–1409756 1409730–1409735 6824 –6825 2268 AAA (Lys): 2267 CAA (Gln) 47–58
5 47 antisense CTTATGGGAGCACTTACAAGC 1409765–1409785 1409759–1409764 6833 – 6834 2278 CT:T (Leu) 47–58
6 49 antisense TTGCTTCATTACCTTCACTGG 1502716–1502736 1502710–1502715 7194 –7195 2398 CCA (Pro): 2399 GTG (Val) 49–52; 49–53
7 51 antisense TTGTGTCACCAGAGTAACAGT 1565282–1565302 1565276–1564281 7323 –7324 2441 ACT (Thr): 2442 GTT (Val) 46–51
8 51 antisense AGTAACCACAGGTTGTGTCAC 1565294–1565314 1565288-1565293 7335 –7336 2445 GTG (Val): 2446 ACA (Thr) 46–51
9 52 antisense TTCAAATTTTGGGCAGCGGTA 1609765–1609785 1609759–1609764 7595 –7596 2532 AC:C (Thr) 47–52
10 52 sense CAAGAGGCTAGAACAATCATT 1609802–1609822 1609823–1609828 7647 −7648 2549 ATC (Ile): 2550 ATT (Ile) 49–52
11 53 antisense TTGTACTTCATCCCACTGATT 1659891–1659911 1659885–1659890 7677 – 7678 2559 AAT (Asn): 2560 CAG (Gln) 49–53
12 53 sense CTTCAGAACCGGAGGCAACAG 1659918–1659938 1659939–1659944 7719 – 7720 2573 CAA (Gln): 2574 CAG (Gln) 46–53
13 53 sense CAACAGTTGAATGAAATGTTA 1659933–1659953 1659954–1659959 7734 –7735 2578 ATG (Met): 2579 TTA(Leu) 46–53
14 53 sense GCCAAGCTTGAGTCATGGAAG 1660017–1660037 1660038–1660043 7818 –7819 2606 TGG (Trp): 2607 AAG (Lys) 46–53
15 53 antisense CTTGGTTTCTGTGATTTTCTT 1660068–1660088 1660062–1660067 7854 – 7855 2618 AAG (Lys): 2619 AAA (Lys) 46–53
16 58 sense TCATTTCACAGGCCTTCAAGA 1860349–1860369 1860370–1860375 8554 –8555 2852 A:AG (Lys) 47–58
17 58 antisense CAGAAATATTCGTACAGTCTC 1860411–1860431 1860405–1860410 8601 –8602 2867 GAG (Gln): 2868 ACT (Thr) 47–58
18 58 antisense CAATTACCTCTGGGCTCCTGG 1860467–1860487 1860461–1860466 8657 – 8658 2886 GT:C (Gln) 47–58

Nucleotide positions are provided with reference to the DMD gene sequence ENS00000198947 analyzed using the Benchling web tool (https://benchling.com/). Bold underlined sequences are intron sequences.