Fig 3. Correspondence between GeneSetDP’s and GeneSetMC’s p values.

We selected 10000 random sets of 10, 20 and 30 genes from the investigated genome definition and calculated their p values with GeneSetMC and GeneSetDP against the “Glycolysis/Gluconeogenesis” pathway. We subsequently plotted the obtained p values against each other. Again, the dashed line shows y = x and the dotted lines y = 2x and y = 0.5x.