Table 1.
In vivo morpholino sequences purchased from Gene Tools, designed according to company guidelines targeted for Tim23 knockdown and list of primer sequences used for real-time PCR analysis
Gene | In Vivo Morpholino Sequence |
---|---|
Tim23 | 5′-TCT TCC GCC ACC TTC CAT GAG GTC-3′ |
Control | 5′-CCT CTT ACC TCA GTT ACA ATT TAT A-3′ |
Primer |
||
---|---|---|
Gene | Forward | Reverse |
Ddit3 (CHOP) | 5′-CAC CAC ACC TGA AAG CAG AA-3′ | 5′-AGG TGA AAG GCA GGG ACT CA-3′ |
ATF5 | 5′-TGG AGC GGG AGA TCC AGT A-3′ | 5′-GAC GCT GGA GAC AGA CGT ACA-3′ |
Hspa9 (mtHsp70) | 5′-TGG CTA TTA CTG CGG GTT CT-3′ | 5′-CAT CTG CTC CAC CTC CTC T-3′ |
Hspd1 (Hsp60) | 5′-CTG GGT GCA AGA GCC ATA TA-3′ | 5′-GAA AGG CTG CTT CTG AAC TCT-3′ |
Hspe1 (cpn10) | 5′-GGA GTG CTG CTG CCG AAA CTG TA-3′ | 5′-TCA CAC TGA CAG GCT CAA TCT-3′ |
Lonp1 (LonP) | 5′-CGA CTT GCA CAG CCC TAT GT-3′ | 5′-CGA ATG TTC CCG TAT GGT AGA T-3′ |
Timm23 (Tim23) | 5′-CCCGAGGCAGATTTGAACTA-3′ | 5′-AAAGCCAGGGAGCCTAGAGTAT-3′ |
B-actin | 5′-TGT GAC GTT ACA TCC GTA A-3′ | 5′-GCT AGG AGC CAG AGG AGT AA-3′ |
18S rRNA | 5′-GTAACCCGTTGAACCCCATT-3′ | 5′-CCATCCAATCGGTAGTAGCG-3′ |
All primers are designed for Mus musculus. ATF5; activating transcription factor 5; CHOP; C/EBP homologous protein; cpn10, chaperonin 10; Hsp60, heat shock protein 60; LonP, lon peptidase; mtHSP70, mitochondrial heat shock protein 70; Tim23, translocase of the inner membrane channel subunit 23.