Table 1.
Overlapping gene enrichment or enrichment overlap of co-modules
| Module | mRNA | miRNA (mRNA) | lncRNA (mRNA) | Overlapping gene enrichment or enrichment overlap |
|---|---|---|---|---|
| 1 | 49 | 4(1390) | 31(29) | Cell-cell signaling; leukocyte migration; metabolic process |
| 4 | 4 | 3(576) | 38(37) | Cytokine-mediated signaling pathway; PI3K-Akt signaling pathway; regulation of immune response |
| 7 | 60 | 4(714) | 37(35) | Cellular protein metabolic process; platelet degranulation; platelet activation; transcription from RNA polymerase II promoter |
| 11 | 56 | 5(432) | 41(40) | Metabolic pathway; Central carbon metabolism in cancer; blood coagulation; platelet activation |
| 12 | 43 | 6(2037) | 40(37) | Viral carcinogenesis; RNA transport; Transcriptional misregulation in cancer; DNA-templated transcription, initiation |
| 17 | 54 | 2(272) | 36(35) | Neuroactive ligand-receptor interaction; transport |
| 26 | 53 | 4(1291) | 33(30) | Positive regulation of transcription from RNA polymerase II promoter |
| 32 | 39 | 5(848) | 40(38) | Innate immune response |