Table 3.
Pathway enrichment analysis (k-clique 9) and their associated weights.
| Pathways | PathRank | N Community | PathGene | PathScore | Community |
|---|---|---|---|---|---|
| ERBB signaling pathway | 0.815143 | 14 | 0.715853953 | 0.763886926 | 4 25 26 33 34 36 38 40 42 43 44 46 47 48 |
| Prolactin signaling pathway | 0.795867 | 15 | 0.72857406 | 0.761477386 | 4 6 11 33 34 36 38 39 40 42 43 44 46 47 48 |
| mTOR signaling pathway | 0.815500 | 4 | 0.687676019 | 0.748865671 | 4 36 42 44 |
| p53 signaling pathway | 0.735875 | 8 | 0.735254081 | 0.735564475 | 4 9 10 12 16 30 32 42 |
| FOXO signaling pathway | 0.787647 | 17 | 0.683991499 | 0.733991752 | 4 5 6 11 12 22 34 36 38 39 42 43 44 45 46 47 48 |
| HIF-1 signaling pathway | 0.796182 | 11 | 0.673983105 | 0.7325388 | 2 4 5 22 34 36 38 41 42 45 46 |
| VEGF signaling pathway | 0.799750 | 16 | 0.663653015 | 0.728530369 | 4 6 11 25 26 33 34 36 38 42 43 44 45 46 47 48 |
| Homologous recombination | 0.689800 | 5 | 0.744804648 | 0.716774892 | 9 24 27 30 32 |
| Thyroid hormone signaling pathway | 0.801071 | 14 | 0.626992865 | 0.708707323 | 4 5 10 20 28 33 34 35 36 37 43 44 46 47 |
| Adherens junction | 0.794533 | 15 | 0.630206366 | 0.70761569 | 4 5 11 25 26 28 33 36 38 40 43 44 46 47 48 |
| Adipocytokine signaling pathway | 0.831000 | 6 | 0.596127825 | 0.703833945 | 4 5 10 42 46 48 |
| TNF signaling pathway | 0.790667 | 12 | 0.621398946 | 0.700941819 | 4 6 11 16 36 39 41 42 45 46 47 48 |
| Neurotrophin signaling pathway | 0.794800 | 15 | 0.61762929 | 0.700636681 | 4 6 11 25 34 36 38 39 40 43 44 45 46 47 48 |
| B cell receptor signaling pathway | 0.839583 | 12 | 0.583361014 | 0.699842972 | 4 33 34 36 38 39 42 44 45 46 47 48 |
| Fc epsilon RI signaling pathway | 0.785500 | 14 | 0.623089264 | 0.699597468 | 4 6 11 25 33 34 36 38 40 43 44 46 47 48 |
| Cell cycle | 0.705455 | 11 | 0.681447933 | 0.693347346 | 4 5 9 10 12 13 22 29 30 32 47 |
| Insulin resistance | 0.854000 | 4 | 0.560416943 | 0.691806381 | 4 5 42 46 |
| PI3K-AKT signaling pathway | 0.802462 | 13 | 0.584009347 | 0.68457654 | 4 22 26 33 34 35 36 38 42 44 45 46 47 |
| Focal adhesion | 0.800353 | 17 | 0.576200699 | 0.679090513 | 4 11 22 25 26 33 34 36 38 40 42 43 44 45 46 47 48 |
| AMPK signaling pathway | 0.817000 | 4 | 0.562233667 | 0.677749885 | 4 10 42 44 |
| NOD-like receptor signaling pathway | 0.786500 | 10 | 0.580649858 | 0.675781853 | 4 6 11 36 39 41 43 46 47 48 |
| Sphingolipid signaling pathway | 0.782615 | 13 | 0.576929156 | 0.671947642 | 4 6 11 33 34 35 36 43 44 45 46 47 48 |
| T cell receptor signaling pathway | 0.776857 | 14 | 0.577623933 | 0.669874076 | 4 6 11 25 26 34 36 38 39 40 44 46 47 48 |
| JAK-STAT signaling pathway | 0.830000 | 6 | 0.523496172 | 0.659167523 | 4 10 34 42 44 46 |
| RAS signaling pathway | 0.780833 | 18 | 0.548420257 | 0.654388889 | 4 8 11 22 25 26 33 34 36 38 40 42 43 44 45 46 47 48 |
| Mismatch repair | 0.720200 | 5 | 0.582186126 | 0.647526407 | 9 15 24 30 32 |
| Estrogen signaling pathway | 0.731111 | 18 | 0.559789644 | 0.639740908 | 1 3 4 6 14 20 31 34 35 36 38 39 40 41 44 45 46 47 |
| MAPK signaling pathway | 0.777053 | 19 | 0.514896219 | 0.63253574 | 4 6 8 11 20 22 25 26 34 36 38 39 42 43 44 45 46 47 48 |
| RAP1 signaling pathway | 0.736048 | 21 | 0.539811636 | 0.630338853 | 1 4 6 11 14 22 25 26 31 33 34 35 36 38 42 43 44 45 46 47 48 |