Table 2.
Examples of SAXS-based titrations or screening
System | Source | Type | Description and notes |
---|---|---|---|
Protein conformational change | |||
Leucine/Isoleucine/Valine | Olah et al. (1993) | titration | contraction of bi-lobe domain upon ligand binding. |
binding protein | Early example using lab-based source. | ||
Transient photoexcitation | Cammarata et al. (2008) | time-resolved SAXS | laser-triggered detachment of carbon monoxide |
of haemoglobin | enables solution characterisation of the relaxed | ||
state(s). | |||
Aspartate transcarbamoylase | Cardia et al. (2008), | time-resolved SAXS | self-regulation of enzyme by substrates and |
Kantrowitz (2012) | regulators | ||
Protein domain assembly | |||
B12-dependent | Ando et al. (2012) | titration | association of two domains in a mixture of 1:1 and |
methyltransferase | 2:1 stoichiometry | ||
Ribonucleotide reductase | Ando et al. (2016) | titration | subunit in dimer-hexamer equilibrium, and |
subunit dimer | |||
Antibody self-association | Fukuda et al. (2017); Tian et al. (2014) | screening | technical studies on antibody stability as a function |
of concentration, pH, buffers and viscosity, | |||
important in clinical applications | |||
Linker-connected domain configurations | |||
Src kinase | Jamros et al. (2010); Yang et al. (2010) | two-point measurement | Assembly state of regulatory domains in the |
presence of SH3 signal peptide | |||
Sxl-lethal RNA-binding | Chen et al. (2018) | titration | Equilibrium between apo-protein, 1:1 protein- |
protein | RNA complex, and 2:2 protein-RNA complex. | ||
Disordered protein interactions | |||
Proliferating Cell | Cordeiro et al. (2017) | titration and population | association of trimer-of-dimer PCNA with |
Nuclear Antigen, p15PAF | modelling | disordered p15 in 3:0–3:3 stoichiometries | |
α-synuclein | Herranz-Trillo et al. (2017) | time-resolved SAXS and | decomposition of species during amyloid fibril |
population modelling | genesis | ||
Micellular compositions | |||
various detergents used in | Lipfert et al. (2007), | titration | Shift in micellular size distributions and |
membrane protein solubilisation | Oliver et al. (2013) | associated shape. | |
Nucleic-acid conformations | |||
dT30 with MgCl2 | Meisburger et al. (2013) | titration | Alteration of polymer properties due to |
coordinating ions. |