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. 2018 Nov 14;19:423. doi: 10.1186/s12859-018-2445-2

Table 1.

Analysis tools used in this study

Read aligner / Expression modeler Differential expression tool
HISAT2/Stringtie Ballgown
Kallisto/Kallisto DESeq2
Salmon/Salmon edgeR
STAR/RSEM limma-voom
STAR/STAR NOISeqBio
SAMseq

Additional details are available in Additional file 3