Table 4.
Gene | SNP | SNP locus | Modality | Reference |
---|---|---|---|---|
LOX | rs10519694 | Intron | GWAS | Bykhovskaya et al., 2012 |
rs2956540 | Intron | GWAS | Dudakova et al., 2015 | |
HGF | rs3735520 | Dudakova et al., 2015 | ||
WNT10a | rs121908120 | mis-sense F228I | GWAS | Cuellar-Partida et al., 2015 |
MPDZ-NF1B | rs1324183 | Li et al., 2013 | ||
ZNF469 | Multiple | Exon sequencing of ZNF469 |
Vincent et al., 2014 Yildiz et al., 2017 Valgaeren et al., 2018 |
|
IL1a | rs2071376 | Intron | Kim et al., 2008 | |
COL5A1 | rs1536482 | Fine-Mapping | Li et al., 2013 | |
FOXO1 | rs2721051 | GWAS | Lu et al., 2013 | |
PDGFRA | rs2114039 | GWAS | Mishra et al., 2012 | |
BANP | rs9938149 | Intergenic | Allele specific | Sahebjada et al., 2013 |
IL1b | rs16944 | Promoter | PCR | Kim et al., 2008 |
rs1143627 | Promoter | |||
VSX1 | R166W, L159M | Heon et al., 2002 | ||
MIR184 | A (r.57 c > u) mutation in the micro-RNA (miRNA) gene MIR184 (OMIM 613146) |
Abu-Amero et al., 2015 Valgaeren et al., 2018 |
||
Mitochondrial complex I genes, (MT-ND1, 2, 3, 4, 4L, 5, and 6), especially MT-ND5 | mitochondrial dna sequencing | Pathak et al., 2011 | ||
SOD1 | 7-base deletion | Intron | Udar et al., 2006 |