Table 3.
Detail information for the SNPs of chicken Mx1 gene
| Markers | Location | Coding region position | Amino acid position | Variation | AA change | Domain1 |
|---|---|---|---|---|---|---|
| SNP1 | exon1 | 8 | 3 | A/G | N3S | ND |
| SNP2 | exon1 | 13 | 5 | C/T | R5W | ND |
| SNP3 | exon1 | 62 | 21 | G/A | R21Q | ND |
| SNP4 | exon1 | 122 | 41 | C/G | P41R | ND |
| SNP5 | exon1 | 125 | 42 | T/C | L42S | ND |
| SNP6 | exon1 | 156 | 52 | T/A | – | ND |
| SNP7 | exon6 | 922 | 308 | G/A | V308I | GD |
| SNP8 | exon6 | 1015 | 339 | A/G | T339A | GD |
| SNP9 | exon8 | 1248 | 416 | A/G | – | MD |
| SNP10 | exon8 | 1257 | 419 | T/C | – | MD |
| SNP11 | exon10 | 1455 | 485 | C/T | – | MD |
| SNP12 | exon10 | 1545 | 515 | G/A | – | MD |
| SNP13 | exon13 | 2019 | 673 | G/A | – | GED |
ND domain not determined, GD GTPase domain, MD Middle domain, GED GTPase effector domain
aMx protein domain