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Beta diversity—Jaccard distance. Holding the lowest p values, Jaccard distance matrix was selected to represent dissimilarities between uninfected control (n=17), MAG1-HIGH chronically infected mice (n=16), and MAG1-LOW chronically infected mice (n=25) subgroups. Pairwise Permanova test was used to calculate the level of significance between subgroups, MAG1-HIGH vs. MAG1-LOW (p=0.04), CON vs. MAG1-HIGH (p=0.003), and CON vs. MAG1-LOW (p=0.001).
